RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ROR2Q01974 943 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 KIF5AQ12840 1032 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 MYO1EQ12965 1108 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 BLMHQ13867 455 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 KRT31Q15323 416 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 TTF1Q15361 905 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 GPR19Q15760 415 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 KCNA10Q16322 511 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC57Q2TAC2 916 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 SLC10A5Q5PT55 438 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 ETV3LQ6ZN32 361 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 OVCH1Q7RTY7 1134 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 SDCCAG8Q86SQ7 713 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 PARD3BQ8TEW8 1205 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 NOC3LQ8WTT2 800 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 ZBTB10Q96DT7 871 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 FAM89AQ96GI7 184 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 ALS2CR12Q96Q35 445 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 CNOT10Q9H9A5 744 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 TMBIM4Q9HC24 238 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 PLCB1Q9NQ66 1216 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 JADE2Q9NQC1 790 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 GDF3Q9NR23 364 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 DTLQ9NZJ0 730 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 RWDD2AQ9UIY3 292 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 LUC7L2Q9Y383 392 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 CD2APQ9Y5K6 639 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 LRRC37AA6NMS7 1700 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 CCT8L1PA6NM43 557 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 DNM1LO00429 736 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 FOXN1O15353 648 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 POLR2DO15514 142 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 TRAPPC3O43617 180 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 SRGAP2O75044 1071 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 FLOT1O75955 427 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 ASLP04424 464 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 C8BP07358 591 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 KIF5BP33176 963 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 HSPA9P38646 679 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 MECP2P51608 486 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 CDK17Q00537 523 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 IFIT5Q13325 482 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 ITGB3BPQ13352 177 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 ITIH4Q14624 930 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 KCNB1Q14721 858 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 DALRD3Q5D0E6 543 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 RILPL1Q5EBL4 403 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 SUSD4Q5VX71 490 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 HAUS3Q68CZ6 603 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 RALYLQ86SE5 291 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 TRIM48Q8IWZ4 208 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 SH2D3CQ8N5H7 860 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 LINC00482Q8N8I6 264 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC197Q8NCU1 140 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 SPATA4Q8NEY3 305 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 NCOA7Q8NI08 942 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 NUP133Q8WUM0 1156 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 NINJ1Q92982 152 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 DACT3Q96B18 629 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 CENPTQ96BT3 561 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 LRRC45Q96CN5 670 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 TBC1D31Q96DN5 1066 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 MED15Q96RN5 788 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 TSC22D3Q99576 134 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 LRRC1Q9BTT6 524 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 NYXQ9GZU5 481 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 TAF1DQ9H5J8 278 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 SMURF1Q9HCE7 757 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 FBXO2Q9UK22 296 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 DSEQ9UL01 958 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 CAPN11Q9UMQ6 739 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 FPGT-TNNI3KV9GXZ4 949 aa8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 TNRC6CQ9HCJ0 1690 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-204ENST00000349311 GRID2IPA4D2P6 1211 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ZNF233A6NK53 670 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 KCNJ18B7U540 433 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 PDLIM1O00151 329 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 GSTA4O15217 222 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 RTN3O95197 1032 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ANP32DO95626 131 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 BMP15O95972 392 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 LRG1P02750 347 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 VIMP08670 466 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 MYZAPP0CAP1 466 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 HSPD1P10809 573 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ALADP13716 330 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 POU3F2P20265 443 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 PEX19P40855 299 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 SEC24CP53992 1094 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 KCNJ12Q14500 433 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms