RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SKA1Q96BD8 255 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 CCDC127Q96BQ5 260 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 HIC2Q96JB3 615 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 KCNK13Q9HB14 408 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 STK32BQ9NY57 414 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 TMCO1Q9UM00 188 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 SYNPO2Q9UMS6 1093 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 GOLGA8RI6L899 631 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 USP1O94782 785 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 P4HBP07237 508 aaKnown RBP19.6■□□□□ 0.73
SCARF1-202ENST00000348987 MAPK4P31152 587 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 RASA3Q14644 834 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 ANKS1BQ7Z6G8 1248 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 GLIS1Q8NBF1 620 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 XXYLT1Q8NBI6 393 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 FBXO27Q8NI29 283 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 FAM151AQ8WW52 585 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 PLEKHG4BQ96PX9 1271 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 OSBPL8Q9BZF1 889 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 MANSC1Q9H8J5 431 aa19.6■□□□□ 0.73
SCARF1-202ENST00000348987 COQ9O75208 318 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 ADSSP30520 456 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 PLA2G4FQ68DD2 849 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 DEFB132Q7Z7B7 95 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 RBM12BQ8IXT5 1001 aaKnown RBP19.59■□□□□ 0.73
SCARF1-202ENST00000348987 TCP10LQ8TDR4 215 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 HNRNPRO43390 633 aaKnown RBP19.59■□□□□ 0.73
SCARF1-202ENST00000348987 DPEP1P16444 411 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 CAP2P40123 477 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 MXI1P50539 228 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 HSD17B4P51659 736 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 CDK16Q00536 496 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 CDC16Q13042 620 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 CLPTM1LQ96KA5 538 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 KLF6Q99612 283 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-202ENST00000348987 EBF3Q9H4W6 596 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 EHMT1Q9H9B1 1298 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 TOPORSQ9NS56 1045 aaPredicted RBP19.59■□□□□ 0.73
SCARF1-202ENST00000348987 SLC17A7Q9P2U7 560 aa19.59■□□□□ 0.73
SCARF1-202ENST00000348987 hCG_2014768A0A024R1R8 64 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 B2RBV5 119 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 ZSCAN5DPP0CG00 497 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 KLRC2P26717 231 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 SOX10P56693 466 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 TKFCQ3LXA3 575 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 ZBED8Q8IZ13 594 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 NAT14Q8WUY8 206 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 CLEC4DQ8WXI8 215 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 ACCSQ96QU6 501 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 TSSK1BQ9BXA7 367 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 TBC1D30Q9Y2I9 924 aa19.58■□□□□ 0.73
SCARF1-202ENST00000348987 OPHN1O60890 802 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 EGFRP00533 1210 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 FAM200BP0CF97 657 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 CRABP2P29373 138 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 YWHABP31946 246 aaKnown RBP19.58■□□□□ 0.72
SCARF1-202ENST00000348987 NOP14P78316 857 aaKnown RBP19.58■□□□□ 0.72
SCARF1-202ENST00000348987 CENPCQ03188 943 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 DEUP1Q05D60 604 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 CETN1Q12798 172 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 KLF1Q13351 362 aaPredicted RBP19.58■□□□□ 0.72
SCARF1-202ENST00000348987 FAM71AQ8IYT1 594 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 ST13P4Q8IZP2 240 aaPredicted RBP19.58■□□□□ 0.72
SCARF1-202ENST00000348987 OGFOD1Q8N543 542 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 DHX38Q92620 1227 aaKnown RBP19.58■□□□□ 0.72
SCARF1-202ENST00000348987 TMEM206Q9H813 350 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 ARHGEF4Q9NR80 690 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 NDE1Q9NXR1 346 aa19.58■□□□□ 0.72
SCARF1-202ENST00000348987 H3BRJ5 948 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 DNAJC6O75061 913 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 EIF2AK2P19525 551 aaKnown RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 QARSP47897 775 aaKnown RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 CCNG2Q16589 344 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 RIPOR1Q6ZS17 1223 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 SPATA24Q86W54 205 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 TTLL6Q8N841 843 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 STKLD1Q8NE28 680 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 NMD3Q96D46 503 aaKnown RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 DDX27Q96GQ7 796 aaKnown RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 OLFM3Q96PB7 478 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 PANX3Q96QZ0 392 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 CCDC28BQ9BUN5 200 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 FHDC1Q9C0D6 1143 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 AGO4Q9HCK5 861 aaKnown RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 RHBDL2Q9NX52 303 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 PSMC3IPQ9P2W1 217 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 TTC36A6NLP5 189 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 ASTN2O75129 1339 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 BANF1O75531 89 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 FDX1P10109 184 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 GRIA2P42262 883 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 PTGER2P43116 358 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 RAP1GDS1P52306 607 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 EFTUD2Q15029 972 aaKnown RBP eCLIP19.57■□□□□ 0.72
SCARF1-202ENST00000348987 ARHGAP24Q8N264 748 aa19.57■□□□□ 0.72
SCARF1-202ENST00000348987 FCHO1O14526 889 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 ICAM1P05362 532 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 ETS1P14921 441 aa19.56■□□□□ 0.72
SCARF1-202ENST00000348987 CYP11B1P15538 503 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms