RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 RIBC1Q8N443 379 aaPredicted RBP16.18■□□□□ 0.18
SRPK1-201ENST00000346162 PPM1NQ8N819 430 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 THAP2Q9H0W7 228 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ORC6Q9Y5N6 252 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ENTPD5O75356 428 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 MXD4Q14582 209 aaPredicted RBP16.18■□□□□ 0.18
SRPK1-201ENST00000346162 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 PLEKHA7Q6IQ23 1121 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 C1orf228Q6PIY5 440 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 CD302Q8IX05 232 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 BBS5Q8N3I7 341 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ZNF507Q8TCN5 953 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ZBED2Q9BTP6 218 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 DDX4Q9NQI0 724 aaKnown RBP16.18■□□□□ 0.18
SRPK1-201ENST00000346162 LCA5LO95447 670 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 PSMC6P62333 389 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 IFI35P80217 286 aaPredicted RBP16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ERMARDQ5T6L9 678 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 CERKQ8TCT0 537 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ACAP3Q96P50 834 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 BAG5Q9UL15 447 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 TRIM33Q9UPN9 1127 aa16.18■□□□□ 0.18
SRPK1-201ENST00000346162 ARIH1Q9Y4X5 557 aaPredicted RBP16.18■□□□□ 0.18
SRPK1-201ENST00000346162 PFDN6O15212 129 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 MGRN1O60291 552 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 ERVK-9P63128 1117 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 MARK2Q7KZI7 788 aaKnown RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 MCUQ8NE86 351 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 RNF139Q8WU17 664 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 RBM15Q96T37 977 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■□□□ 13
SRPK1-201ENST00000346162 EPAS1Q99814 870 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 TARS2Q9BW92 718 aaKnown RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 GPRC5CQ9NQ84 441 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 KLHL8Q9P2G9 620 aaPredicted RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 TBX20Q9UMR3 447 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 CBX6O95503 412 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 FIS1Q9Y3D6 152 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 DPEP1P16444 411 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 LPCAT2Q7L5N7 544 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 SAMD7Q7Z3H4 446 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 GPR141Q7Z602 305 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 CDR2LQ86X02 465 aaPredicted RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 SENP7Q9BQF6 1050 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 FOXP3Q9BZS1 431 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 KLHL4Q9C0H6 718 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 ASB14A6NK59 587 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 MUTP22033 750 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 OASLQ15646 514 aaKnown RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 DRAXINQ8NBI3 349 aaPredicted RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 RDM1Q8NG50 284 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 ATXN2LQ8WWM7 1075 aaKnown RBP16.17■□□□□ 0.18
SRPK1-201ENST00000346162 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 GTF3C4Q9UKN8 822 aa16.17■□□□□ 0.18
SRPK1-201ENST00000346162 A8MXQ7 604 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SERPINB10P48595 397 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SGSM1Q2NKQ1 1148 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
SRPK1-201ENST00000346162 RCOR2Q8IZ40 523 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 GDF3Q9NR23 364 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SLC12A6Q9UHW9 1150 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 LOC100653049A0A140TA62 436 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SH3BP5O60239 455 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 KRT34O76011 436 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 UNC5CO95185 931 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 ATXN3P54252 364 aaPredicted RBP16.16■□□□□ 0.18
SRPK1-201ENST00000346162 ROR1Q01973 937 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SPOPLQ6IQ16 392 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 DCLK2Q8N568 766 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 C17orf75Q9HAS0 396 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SMNDC1O75940 238 aaKnown RBP eCLIP16.16■□□□□ 0.18
SRPK1-201ENST00000346162 CBWD2Q8IUF1 395 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 HDAC11Q96DB2 347 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 ZNF180Q9UJW8 692 aa16.16■□□□□ 0.18
SRPK1-201ENST00000346162 SP100P23497 879 aaPredicted RBP16.15■□□□□ 0.18
SRPK1-201ENST00000346162 USP46P62068 366 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 HIF1AQ16665 826 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 TMC3Q7Z5M5 1100 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 GPRASP2Q96D09 838 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 DCUN1D5Q9BTE7 237 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 DHX35Q9H5Z1 703 aaKnown RBP16.15■□□□□ 0.18
SRPK1-201ENST00000346162 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 EURLQ9NYK6 297 aa16.15■□□□□ 0.18
SRPK1-201ENST00000346162 GGA3Q9NZ52 723 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms