RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ABCE1P61221 599 aaKnown RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 NBPF12Q5TAG4 269 aaPredicted RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 CAPRIN2Q6IMN6 1127 aaKnown RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 KCNV1Q6PIU1 500 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 COLEC11Q9BWP8 271 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 PTPRHQ9HD43 1115 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 STRNO43815 780 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 GGCXP38435 758 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 CCL23P55773 120 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 UBE2Q2Q8WVN8 375 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 OLFML3Q9NRN5 406 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 RUNX1T1Q06455 604 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 ZC2HC1CQ53FD0 456 aaPredicted RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 UNKQ9C0B0 810 aaKnown RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 SPACA6W5XKT8 324 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 VSTM4Q8IW00 320 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 KCTD10Q9H3F6 313 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 DBR1Q9UK59 544 aaKnown RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 PADI4Q9UM07 663 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CSF1RP07333 972 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CYP2C8P10632 490 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 OSBPL1AQ9BXW6 950 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 ZNF185O15231 689 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 MFAP3LO75121 409 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 NDUFB10O96000 172 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 ABCB1P08183 1280 aaPredicted RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 EIF3BP55884 814 aaKnown RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CUL4AQ13619 759 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 FAM20AQ96MK3 541 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CDC27P30260 824 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 BTG3Q14201 252 aaPredicted RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 NFIL3Q16649 462 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 LY6KQ17RY6 165 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 DDI2Q5TDH0 399 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CLYBLQ8N0X4 340 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CATSPERBQ9H7T0 1116 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 ERAP1Q9NZ08 941 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 E9PBE3 544 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 SH3BGRLO75368 114 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CPSF4O95639 269 aaKnown RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CLEC16AQ2KHT3 1053 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CLIP3Q96DZ5 547 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 TAAR1Q96RJ0 339 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 MYL2P10916 166 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 SYTL1Q8IYJ3 562 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 RPRD1AQ96P16 312 aaPredicted RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 WDCPQ9H6R7 721 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 SMPD4Q9NXE4 827 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 ATP6V1HQ9UI12 483 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CHURC1-FNTBB4DL54 471 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 POU1F1P28069 291 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 RAD23BP54727 409 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 BFSP2Q13515 415 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 EMC2Q15006 297 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 MAPRE2Q15555 327 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 FAXCQ5TGI0 409 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 SLC25A24Q6NUK1 477 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 AHI1Q8N157 1196 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 NSMCE4AQ9NXX6 385 aa12.74□□□□□ -0.37
TRIOBP-202ENST00000344404 CHGBP05060 677 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 RAP1GAPP47736 663 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 CLK1P49759 484 aaKnown RBP12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 POU4F1Q01851 419 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 ACTN3Q08043 901 aaPredicted RBP12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 CNTN1Q12860 1018 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 FBXO32Q969P5 355 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 ADAM21Q9UKJ8 722 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 CHMP2BQ9UQN3 213 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 POLR1DQ9Y2S0 133 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 IPPQ9Y573 584 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 PSMD12O00232 456 aaPredicted RBP12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 NOTUMQ6P988 496 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 GID8Q9NWU2 228 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 BARHL2Q9NY43 387 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 CLASP2O75122 1294 aaKnown RBP12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 RGS4P49798 205 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 LONRF1Q17RB8 773 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 SEPT1Q8WYJ6 367 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 NOP53Q9NZM5 478 aaKnown RBP12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 AMACRQ9UHK6 382 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 CDC25BP30305 580 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 RBBP4Q09028 425 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 LAMC2Q13753 1193 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 PTGISQ16647 500 aa12.73□□□□□ -0.37
TRIOBP-202ENST00000344404 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms