RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 PROCP04070 461 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 PDIA5Q14554 519 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 MORF4L2Q15014 288 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 MIS18BP1Q6P0N0 1132 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
KPNA1-201ENST00000344337 NAT16Q8N8M0 369 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 CATSPER2Q96P56 530 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 PAFAH2Q99487 392 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 KDM4CQ9H3R0 1056 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 NINJ2Q9NZG7 142 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 FBXO40Q9UH90 709 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 AGAP1Q9UPQ3 857 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 SCINQ9Y6U3 715 aa8.15□□□□□ -1.1
KPNA1-201ENST00000344337 MAP1BP46821 2468 aaKnown RBP8.15□□□□□ -1.11
KPNA1-201ENST00000344337 TMEM253P0C7T8 217 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 VHLP40337 213 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 IRX1P78414 480 aaPredicted RBP8.15□□□□□ -1.11
KPNA1-201ENST00000344337 SEPT12Q8IYM1 358 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 B4GALNT2Q8NHY0 566 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 E2F7Q96AV8 911 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 LRRC4CQ9HCJ2 640 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 BCAP29Q9UHQ4 241 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 SYCE1LA8MT33 242 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 SCAMP3O14828 347 aaKnown RBP8.15□□□□□ -1.11
KPNA1-201ENST00000344337 OSBPP22059 807 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 RPA1P27694 616 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 UBAP2Q5T6F2 1119 aaKnown RBP8.15□□□□□ -1.11
KPNA1-201ENST00000344337 MFSD7Q6UXD7 560 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 GPD1LQ8N335 351 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 HAUS8Q9BT25 410 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 MMTAG2Q9BU76 263 aaKnown RBP8.15□□□□□ -1.11
KPNA1-201ENST00000344337 RANBP17Q9H2T7 1088 aaKnown RBP8.15□□□□□ -1.11
KPNA1-201ENST00000344337 IP6K2Q9UHH9 426 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 SNX13Q9Y5W8 968 aa8.15□□□□□ -1.11
KPNA1-201ENST00000344337 CENPFP49454 3210 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ITSN1Q15811 1721 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ADGRB1O14514 1584 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 GJB1P08034 283 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 PTENP60484 403 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 STX1BP61266 288 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 RPL7AP62424 266 aaKnown RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 FAAP100Q0VG06 881 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 RFWD3Q6PCD5 774 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 CCNJLQ8IV13 435 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 TRAPPC12Q8WVT3 735 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 PHF21BQ96EK2 531 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 CCDC68Q9H2F9 335 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 RXFP1Q9HBX9 757 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ARHGEF28Q8N1W1 1705 aaKnown RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ASAP2O43150 1006 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ANO5Q75V66 913 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 SCUBE1Q8IWY4 988 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ACTL9Q8TC94 416 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 UCMAQ8WVF2 138 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 CPB2Q96IY4 423 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 FAM20AQ96MK3 541 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ZNF395Q9H8N7 513 aaPredicted RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 HNRNPRO43390 633 aaKnown RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 SNX3O60493 162 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 KRT38O76015 456 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 P4HA1P13674 534 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 BAG6P46379 1132 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 MRPS22P82650 360 aaKnown RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 AUHQ13825 339 aaKnown RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 MAPK6Q16659 721 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 C16orf86Q6ZW13 317 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 FITM2Q8N6M3 262 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 KIF12Q96FN5 646 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 RNPEPQ9H4A4 650 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 KDM6AO15550 1401 aaPredicted RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 C9JVG2 144 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 CCND2P30279 289 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 GPC3P51654 580 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 DCAF6Q58WW2 860 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 FBXO48Q5FWF7 155 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 OTUD3Q5T2D3 398 aaPredicted RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 FBXO33Q7Z6M2 555 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 MCF2L2Q86YR7 1114 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ZNF75CPQ92670 426 aaPredicted RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 EDEM3Q9BZQ6 932 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 CHST12Q9NRB3 414 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 SLC17A7Q9P2U7 560 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ZMYND8Q9ULU4 1186 aaPredicted RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 POLIQ9UNA4 740 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 R3HDM2Q9Y2K5 976 aaKnown RBP8.14□□□□□ -1.11
KPNA1-201ENST00000344337 MYH1P12882 1939 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 MYH4Q9Y623 1939 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 NINQ8N4C6 2090 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 SH3BGRLO75368 114 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 RARGP13631 454 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ELK3P41970 407 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 CXCR3P49682 368 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 TAF5Q15542 800 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 MEA1Q16626 185 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 ANKRD20A4Q4UJ75 823 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 LRRC74BQ6ZQY2 392 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 TNS4Q8IZW8 715 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 PRELID2Q8N945 189 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 HASPINQ8TF76 798 aa8.14□□□□□ -1.11
KPNA1-201ENST00000344337 RPAP3Q9H6T3 665 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms