RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 LDHDQ86WU2 507 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 VGLL2Q8N8G2 317 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 GDPD5Q8WTR4 605 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 EME1Q96AY2 570 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 HSPBAP1Q96EW2 488 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 CYTH2Q99418 400 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 ISCA1Q9BUE6 129 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 MRPL1Q9BYD6 325 aaKnown RBP8.53□□□□□ -1.04
ATG4A-201ENST00000343524 UNKQ9C0B0 810 aaKnown RBP8.53□□□□□ -1.04
ATG4A-201ENST00000343524 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 MANSC1Q9H8J5 431 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 C6orf50Q9HD87 102 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 UBAP1Q9NZ09 502 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-201ENST00000343524 SYNPO2Q9UMS6 1093 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 LZTS1Q9Y250 596 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 RSPH10B2B2RC85 870 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 hCG_1984214I3L0E3 225 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF701M0R085 212 aaPredicted RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 FCHO1O14526 889 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 PRKAB2O43741 272 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 PDE8AO60658 829 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 RSPH10BP0C881 870 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 PHKG2P15735 406 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 SLC9A1P19634 815 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 ABCB4P21439 1286 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 HMOX2P30519 316 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 RPA3P35244 121 aaPredicted RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 CHKAP35790 457 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 FDFT1P37268 417 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 PHKA1P46020 1223 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 CDK9P50750 372 aaKnown RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 AQP4P55087 323 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 NCKAP1LP55160 1127 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 APOFQ13790 326 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 CLEC16AQ2KHT3 1053 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 LETM2Q2VYF4 491 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 TMEM63BQ5T3F8 832 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 NIPAL1Q6NVV3 410 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 NEPROQ6NW34 567 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 DPY19L2P1Q6NXN4 242 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF410Q86VK4 478 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 DZIP1Q86YF9 867 aaKnown RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 GLYCTKQ8IVS8 523 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 IFNL2Q8IZJ0 200 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 ZCCHC9Q8N567 271 aaKnown RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF713Q8N859 430 aaPredicted RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 ARL10Q8N8L6 244 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 SNX29Q8TEQ0 813 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 GIPC3Q8TF64 312 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 EFHD2Q96C19 240 aaPredicted RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 DRC3Q9H069 523 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 KCTD10Q9H3F6 313 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 KIAA1586Q9HCI6 787 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 C6orf203Q9P0P8 240 aaPredicted RBP8.52□□□□□ -1.04
ATG4A-201ENST00000343524 DKK3Q9UBP4 350 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 PPM1HQ9ULR3 514 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 PLA2G4CQ9UP65 541 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 DTNAQ9Y4J8 743 aa8.52□□□□□ -1.04
ATG4A-201ENST00000343524 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SPOPO43791 374 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 CETPP11597 493 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 ACTN1P12814 892 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 CDH2P19022 906 aaPredicted RBP8.52□□□□□ -1.05
ATG4A-201ENST00000343524 ADCY8P40145 1251 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SLC1A1P43005 524 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 NAA20P61599 178 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 GPC5P78333 572 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 FOLH1Q04609 750 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 TNIP1Q15025 636 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 LRRC41Q15345 812 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 CALCRLQ16602 461 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 RARS2Q5T160 578 aaKnown RBP8.52□□□□□ -1.05
ATG4A-201ENST00000343524 DEPDC1Q5TB30 811 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 ANKS1BQ7Z6G8 1248 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SDR16C5Q8N3Y7 309 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.05
ATG4A-201ENST00000343524 DDHD1Q8NEL9 900 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 ZFP28Q8NHY6 868 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 CEP95Q96GE4 821 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 PNMA5Q96PV4 448 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 GRIP2Q9C0E4 1043 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SENP6Q9GZR1 1112 aaPredicted RBP8.52□□□□□ -1.05
ATG4A-201ENST00000343524 DNAJC18Q9H819 358 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 TRPC7Q9HCX4 862 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SIX2Q9NPC8 291 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SLC7A8Q9UHI5 535 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 SOX13Q9UN79 622 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 EXOC7Q9UPT5 735 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 COQ6Q9Y2Z9 468 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 NEU2Q9Y3R4 380 aa8.52□□□□□ -1.05
ATG4A-201ENST00000343524 IGSF9BQ9UPX0 1349 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms