RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SLCO1B7G3V0H7 640 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PSMD3O43242 534 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ATMINO43313 823 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PPIP5K2O43314 1243 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TBC1D4O60343 1298 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 FDX1P10109 184 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PDAP1Q13442 181 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 UGP2Q16851 508 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SCARA5Q6ZMJ2 495 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ZCCHC9Q8N567 271 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PRCCQ92733 491 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TMEM121Q9BTD3 319 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 BEGAINQ9BUH8 593 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 OSBPL7Q9BZF2 842 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 CCDC90BQ9GZT6 254 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 LRRC4Q9HBW1 653 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TBX20Q9UMR3 447 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SATB2Q9UPW6 733 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 HNRNPRO43390 633 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 E2F6O75461 281 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SEC24DO94855 1032 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TTKP33981 857 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 CRKP46108 304 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KIAA2013Q8IYS2 634 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 OR6Y1Q8NGX8 325 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 AURKCQ9UQB9 309 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PCDHA10Q9Y5I2 948 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 AP1G2O75843 785 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 FESP07332 822 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SRGAP2CP0DJJ0 459 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 YY1P25490 414 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 XIAPP98170 497 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 RRP1BQ14684 758 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 NKX1-1Q15270 411 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 STILQ15468 1287 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KBTBD12Q3ZCT8 623 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 CCDC153Q494R4 210 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 AGR3Q8TD06 166 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 LRMDAQ9H2I8 198 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 DNAJC18Q9H819 358 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 PCSK1NQ9UHG2 260 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MYH11P35749 1972 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 KLRC4O43908 158 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MED24O75448 989 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SGPL1O95470 568 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 SREBF1P36956 1147 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 FDFT1P37268 417 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ERFP50548 548 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TCP10LQ8TDR4 215 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ATG4AQ8WYN0 398 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 APOPT1Q96IL0 206 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ADAM33Q9BZ11 813 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 EBF2Q9HAK2 575 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 DNALI1O14645 258 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 CST8O60676 142 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 GCLCP48506 637 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 FAM98CQ17RN3 349 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 CLEC4FQ8N1N0 589 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 BBS5Q8N3I7 341 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 DCLK2Q8N568 766 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 DLG3Q92796 817 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 LENG1Q96BZ8 264 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ADNPQ9H2P0 1102 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 BFARQ9NZS9 450 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 AKT3Q9Y243 479 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 C2CD2LO14523 706 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 LSM8O95777 96 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 APOA1P02647 267 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 ACAT1P24752 427 aaKnown RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 MAP3K10Q02779 954 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 BLMHQ13867 455 aa4.99□□□□□ -1.61
CSMD3-203ENST00000343508 LBHD1Q9BQE6 289 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-203ENST00000343508 TRDMT1O14717 391 aaKnown RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 PRPF4O43172 522 aaKnown RBP eCLIP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 PSMA4P25789 261 aaKnown RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 ADARP55265 1226 aaKnown RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 MAB21L3Q8N8X9 362 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 CNKSR1Q969H4 720 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 MRPS26Q9BYN8 205 aaKnown RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 TASP1Q9H6P5 420 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 CHORDC1Q9UHD1 332 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 ZBBXA8MT70 800 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 M0QZ92 97 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 AIM2O14862 343 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 SUPT3HO75486 399 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 S100BP04271 92 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 CDC25CP30307 473 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 S100A5P33763 92 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 ETNPPLQ8TBG4 499 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 FAR2Q96K12 515 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 INPP4AQ96PE3 977 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 MXRA8Q9BRK3 442 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 CAAP1Q9H8G2 361 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 KRT82Q9NSB4 513 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 NARFQ9UHQ1 456 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 NUP188Q5SRE5 1749 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 DISP2A7MBM2 1401 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 PI4K2BG5E9Z4 385 aa4.98□□□□□ -1.61
CSMD3-203ENST00000343508 SMNDC1O75940 238 aaKnown RBP eCLIP4.98□□□□□ -1.61
CSMD3-203ENST00000343508 MROH9Q5TGP6 573 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms