RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 GSCP56915 257 aaPredicted RBP21.14■□□□□ 0.97
RTN1-202ENST00000342503 DR1Q01658 176 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 LLGL1Q15334 1064 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 SOWAHAQ2M3V2 549 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 FBXO47Q5MNV8 452 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 MAP3K21Q5TCX8 1036 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 ACOT1Q86TX2 421 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 XYLT1Q86Y38 959 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 C12orf29Q8N999 325 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 PCSK9Q8NBP7 692 aaKnown RBP21.14■□□□□ 0.97
RTN1-202ENST00000342503 MAGOHBQ96A72 148 aaKnown RBP21.14■□□□□ 0.97
RTN1-202ENST00000342503 SYNCQ9H7C4 482 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 WDR35Q9P2L0 1181 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 DDX20Q9UHI6 824 aaKnown RBP21.14■□□□□ 0.97
RTN1-202ENST00000342503 TSPAN16Q9UKR8 245 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 SIGLEC16A6NMB1 481 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 PTGESO14684 152 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 SPTLC1O15269 473 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 RPLP2P05387 115 aaKnown RBP21.13■□□□□ 0.97
RTN1-202ENST00000342503 HOXD11P31277 338 aaPredicted RBP21.13■□□□□ 0.97
RTN1-202ENST00000342503 GJC1P36383 396 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 GABRB2P47870 512 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 PDCLQ13371 301 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 ZNF268Q14587 947 aaPredicted RBP21.13■□□□□ 0.97
RTN1-202ENST00000342503 GOLGA7BQ2TAP0 167 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 DDX42Q86XP3 938 aaKnown RBP eCLIP21.13■□□□□ 0.97
RTN1-202ENST00000342503 KATNAL2Q8IYT4 538 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 OR6B3Q8NGW1 331 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 ZBTB9Q96C00 473 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 TRIM51Q9BSJ1 452 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 ST7Q9NRC1 585 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 FAM105AQ9NUU6 356 aa21.13■□□□□ 0.97
RTN1-202ENST00000342503 KPNA7A9QM74 516 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 F8VP50 259 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 PFKMP08237 780 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 FAM153BP0C7A2 387 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 KRT3P12035 628 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 PNPLA4P41247 253 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 TAF6P49848 677 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 NNTQ13423 1086 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 CUL1Q13616 776 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 DHX34Q14147 1143 aaKnown RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 STILQ15468 1287 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 CYP1B1Q16678 543 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 FAM153CQ494X1 144 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 PPP1R26Q5T8A7 1209 aaPredicted RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 TTC27Q6P3X3 843 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 UNC93AQ86WB7 457 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 JOSD2Q8TAC2 188 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 OSBPL7Q9BZF2 842 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 ACBD3Q9H3P7 528 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 AGO3Q9H9G7 860 aaKnown RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 GDAP2Q9NXN4 497 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 FAM153AQ9UHL3 310 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 FAM187AA6NFU0 413 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 MEIS3P2A8K0S8 358 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 TCF4P15884 667 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 RFC1P35251 1148 aaPredicted RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 PTGIRP43119 386 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 PIGHQ14442 188 aaPredicted RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 NIPA2Q8N8Q9 360 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 EIF1ADQ8N9N8 165 aaKnown RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 RAET1EQ8TD07 263 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 ZFP42Q96MM3 310 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 PPP1R10Q96QC0 940 aaKnown RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 HERPUD2Q9BSE4 406 aa21.12■□□□□ 0.97
RTN1-202ENST00000342503 METTL5Q9NRN9 209 aaKnown RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 UTP11Q9Y3A2 253 aaKnown RBP21.12■□□□□ 0.97
RTN1-202ENST00000342503 H3BQF6 201 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 GPR182O15218 404 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 DAPK3O43293 454 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 FGFR1P11362 822 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 OAS2P29728 719 aaKnown RBP21.11■□□□□ 0.97
RTN1-202ENST00000342503 ECHS1P30084 290 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 ITGA7Q13683 1181 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 SV2CQ496J9 727 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 RNF180Q86T96 592 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 CCDC50Q8IVM0 306 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 C12orf50Q8NA57 414 aaPredicted RBP21.11■□□□□ 0.97
RTN1-202ENST00000342503 EXD1Q8NHP7 514 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 KBTBD7Q8WVZ9 684 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 SEC14L1Q92503 715 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 MCRS1Q96EZ8 462 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 DPEP3Q9H4B8 488 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 FAM49BQ9NUQ9 324 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 PCYOX1Q9UHG3 505 aa21.11■□□□□ 0.97
RTN1-202ENST00000342503 A8MXQ7 604 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 HCRTO43612 131 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 PSMA2P25787 234 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 LRPAP1P30533 357 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 COILP38432 576 aaPredicted RBP21.1■□□□□ 0.97
RTN1-202ENST00000342503 APLP1P51693 650 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 GPS2Q13227 327 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 HLTFQ14527 1009 aaKnown RBP eCLIP21.1■□□□□ 0.97
RTN1-202ENST00000342503 CCDC137Q6PK04 289 aaKnown RBP21.1■□□□□ 0.97
RTN1-202ENST00000342503 JAMLQ86YT9 394 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.1■□□□□ 0.97
RTN1-202ENST00000342503 LPIN3Q9BQK8 851 aa21.1■□□□□ 0.97
RTN1-202ENST00000342503 RAB17Q9H0T7 212 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms