RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CLCNKBP51801 687 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 SNRPFP62306 86 aaKnown RBP11.1□□□□□ -0.63
TPM3-207ENST00000341372 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
TPM3-207ENST00000341372 SNW1Q13573 536 aaKnown RBP11.1□□□□□ -0.63
TPM3-207ENST00000341372 TJAP1Q5JTD0 557 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 TAS1R1Q7RTX1 841 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 GPATCH11Q8N954 259 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 NINJ1Q92982 152 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 RXFP1Q9HBX9 757 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 UBQLN1Q9UMX0 589 aaKnown RBP11.1□□□□□ -0.63
TPM3-207ENST00000341372 DERAQ9Y315 318 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 PODXLO00592 558 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 PER2O15055 1255 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 TGFB1I1O43294 461 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 KCNA5P22460 613 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 ACOT2P49753 483 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 DLX2Q07687 328 aaPredicted RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 KCNB1Q14721 858 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 RBM23Q86U06 439 aaKnown RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 GALNT12Q8IXK2 581 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 C12orf56Q8IXR9 622 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 AUTS2Q8WXX7 1259 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 RABGGTAQ92696 567 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 C18orf25Q96B23 403 aaPredicted RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 CBWD1Q9BRT8 395 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 CHRDQ9H2X0 955 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 LMBRD1Q9NUN5 540 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 EXOC1Q9NV70 894 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 CLEC1BQ9P126 229 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 TUBGCP4Q9UGJ1 667 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 ZMYM5Q9UJ78 669 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 MCM8Q9UJA3 840 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 C2CD2Q9Y426 696 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 HRH3Q9Y5N1 445 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 CUL9Q8IWT3 2517 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 PLXNA3P51805 1871 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 EREGO14944 169 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 XPOTO43592 962 aaKnown RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 TADA2AO75478 443 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 ADH1BP00325 375 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 C1RP00736 705 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 RPN1P04843 607 aaKnown RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 BMP1P13497 986 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 STK4Q13043 487 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 CAMK2GQ13555 558 aaPredicted RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 SNAP47Q5SQN1 464 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 SPATA1Q5VX52 437 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 ELOA2Q8IYF1 753 aaPredicted RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 TMEM174Q8WUU8 243 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 FBXL18Q96ME1 805 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 TIGD1Q96MW7 591 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 GBP4Q96PP9 640 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 IGFLR1Q9H665 355 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 SLC39A2Q9NP94 309 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM3-207ENST00000341372 MRPL17Q9NRX2 175 aaKnown RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 CGNQ9P2M7 1197 aaKnown RBP11.09□□□□□ -0.63
TPM3-207ENST00000341372 HCFC2Q9Y5Z7 792 aa11.09□□□□□ -0.63
TPM3-207ENST00000341372 B2RBV5 119 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 AKAP10O43572 662 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 EXTL3O43909 919 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 B3GAT3O94766 335 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 IL18RAPO95256 599 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 NFICP08651 508 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 CNPP09543 421 aaKnown RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 IGFBP6P24592 240 aaPredicted RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 KCNQ1P51787 676 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 RTP2Q5QGT7 225 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 JADE1Q6IE81 842 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 ZSWIM2Q8NEG5 633 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SLC22A17Q8WUG5 538 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 CCDC34Q96HJ3 373 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 KLHL5Q96PQ7 755 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 BARX2Q9UMQ3 279 aaPredicted RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 TSC2P49815 1807 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 MTCL1Q9Y4B5 1905 aaKnown RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 RASGRP1O95267 797 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SRGAP2BP0DMP2 458 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 FGFR3P22607 806 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 AARSP49588 968 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM3-207ENST00000341372 NDUFV1P49821 464 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 GUCY2FP51841 1108 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 CREMQ03060 361 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms