RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ACSF2Q96CM8 615 aaPredicted RBP15.34■□□□□ 0.05
TDP2-201ENST00000341060 TMEM121Q9BTD3 319 aa15.34■□□□□ 0.05
TDP2-201ENST00000341060 C2orf40Q9H1Z8 148 aa15.34■□□□□ 0.05
TDP2-201ENST00000341060 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
TDP2-201ENST00000341060 ZBTB42B2RXF5 422 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 B4GALT4O60513 344 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 SLC18A1P54219 525 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 YWHAEP62258 255 aaKnown RBP15.33■□□□□ 0.04
TDP2-201ENST00000341060 SLC25A11Q02978 314 aaKnown RBP15.33■□□□□ 0.04
TDP2-201ENST00000341060 MTFR1Q15390 333 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 ZKSCAN8Q15776 578 aaPredicted RBP15.33■□□□□ 0.04
TDP2-201ENST00000341060 CGB2Q6NT52 195 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 MPZL3Q6UWV2 235 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 TSHZ1Q6ZSZ6 1077 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 EXOC8Q8IYI6 725 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 HAUS1Q96CS2 278 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 PPCSQ9HAB8 311 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 AGAP1Q9UPQ3 857 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 SNCAIPQ9Y6H5 919 aa15.33■□□□□ 0.04
TDP2-201ENST00000341060 SGK1O00141 431 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 PRPF4O43172 522 aaKnown RBP eCLIP15.32■□□□□ 0.04
TDP2-201ENST00000341060 MARK3P27448 753 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 POLR2BP30876 1174 aaKnown RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 IL9RQ01113 521 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 LY6KQ17RY6 165 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 CENPUQ71F23 418 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 ZBED8Q8IZ13 594 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 LRRC71Q8N4P6 559 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 FNIP1Q8TF40 1166 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 PRCCQ92733 491 aaPredicted RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 GRAMD1AQ96CP6 724 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 LHX5Q9H2C1 402 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 SENP1Q9P0U3 644 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 SIGLEC16A6NMB1 481 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 ALOX15BO15296 676 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 ASMTLO95671 621 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 TNNC2P02585 160 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 KRT7P08729 469 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 TAC1P20366 129 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 GSCP56915 257 aaPredicted RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 WDR4P57081 412 aaKnown RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 NCALDP61601 193 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 ACVR2BQ13705 512 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 VGLL4Q14135 290 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 RASA2Q15283 850 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 ANKRD36BP1Q96IX9 119 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 PHACTR1Q9C0D0 580 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 SPATC1LQ9H0A9 340 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 RXFP1Q9HBX9 757 aa15.32■□□□□ 0.04
TDP2-201ENST00000341060 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
TDP2-201ENST00000341060 MED7O43513 233 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 LRCH4O75427 683 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 LGR5O75473 907 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 USP2O75604 605 aaPredicted RBP15.31■□□□□ 0.04
TDP2-201ENST00000341060 KRT3P12035 628 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 PSMA2P25787 234 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 RDXP35241 583 aaKnown RBP15.31■□□□□ 0.04
TDP2-201ENST00000341060 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 BNIP1Q12981 228 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 PRKG1Q13976 671 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 DENND1BQ6P3S1 775 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 PCGF5Q86SE9 256 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 NCAPG2Q86XI2 1143 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 TRIM50Q86XT4 487 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 GPR20Q99678 358 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 FRMD8P1Q9BZ68 369 aaPredicted RBP15.31■□□□□ 0.04
TDP2-201ENST00000341060 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 CITO14578 2027 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 POC1B-GALNT4F8VUJ3 575 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 ACKR2O00590 384 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 ARIH2O95376 493 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 IFNB1P01574 187 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 FOXN2P32314 431 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 SMTNL2Q2TAL5 461 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 ATF7IP2Q5U623 682 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 PLPPR4Q7Z2D5 763 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 RHPN2Q8IUC4 686 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 THNSL1Q8IYQ7 743 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 FITM2Q8N6M3 262 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 ARFGAP1Q8N6T3 406 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 TTC13Q8NBP0 860 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 DENND1AQ8TEH3 1009 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 BCO2Q9BYV7 579 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 TRABDQ9H4I3 376 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 VPS37BQ9H9H4 285 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 KLHL14Q9P2G3 628 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 SLC24A2Q9UI40 661 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 CYTH4Q9UIA0 394 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 AGTPBP1Q9UPW5 1226 aa15.31■□□□□ 0.04
TDP2-201ENST00000341060 GOLGA8SH3BPF8 625 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 MAGEB2O15479 319 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 ATP6V1G2O95670 118 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 IL1R2P27930 398 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms