RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 ANAPC5Q9UJX4 755 aa16.8■□□□□ 0.28
CCDC144A-202ENST00000340621 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
CCDC144A-202ENST00000340621 MICAL2O94851 1124 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 ERBB2P04626 1255 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 SEC24CP53992 1094 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 BYSLQ13895 437 aaKnown RBP16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 XYLT1Q86Y38 959 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 PGM2Q96G03 612 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 PARK7Q99497 189 aaKnown RBP16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 DNPEPQ9ULA0 475 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 C2CD2Q9Y426 696 aa16.79■□□□□ 0.28
CCDC144A-202ENST00000340621 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 LIASO43766 372 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 TJP3O95049 919 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 PSMA2P25787 234 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 HOXA11P31270 313 aaPredicted RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 RBP5P82980 135 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 TRMT10CQ7L0Y3 403 aaKnown RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 DPH6Q7L8W6 267 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 GSTA5Q7RTV2 222 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 EMC1Q8N766 993 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 ADPGKQ9BRR6 497 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 FAM49AQ9H0Q0 323 aaPredicted RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 ADAMTS10Q9H324 1103 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 CDC42EP4Q9H3Q1 356 aaKnown RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 SYNCQ9H7C4 482 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 CDHR5Q9HBB8 845 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 DNAJC17Q9NVM6 304 aaKnown RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 LRRD1A4D1F6 860 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 NDUFAB1O14561 156 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 P4HA1P13674 534 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 KLRC2P26717 231 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 CDKN2BP42772 138 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 GPD2P43304 727 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 COPS2P61201 443 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 IFI35P80217 286 aaPredicted RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 EPS8L3Q8TE67 593 aaKnown RBP16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 TMEM109Q9BVC6 243 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
CCDC144A-202ENST00000340621 CELF2O95319 508 aaKnown RBP16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 SLCO1A2P46721 670 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 NDST1P52848 882 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 FKBP1BP68106 108 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 CNGA2Q16280 664 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 C6orf118Q5T5N4 469 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 C2orf69Q8N8R5 385 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 CCDC89Q8N998 374 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 GLIS1Q8NBF1 620 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 UBA3Q8TBC4 463 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 ZWILCHQ9H900 591 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 PPANQ9NQ55 473 aaKnown RBP16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 DDX56Q9NY93 547 aaKnown RBP16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 BARX2Q9UMQ3 279 aaPredicted RBP16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 ANK1P16157 1881 aa16.77■□□□□ 0.28
CCDC144A-202ENST00000340621 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 hCG_1818297A0A087WSY0 165 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 C3orf70A6NLC5 250 aaPredicted RBP16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 M0QYV0 167 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 RGS16O15492 202 aaPredicted RBP16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 LRCH4O75427 683 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 NPTXRO95502 500 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 ACSL3O95573 720 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 VDRP11473 427 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 IL1R2P27930 398 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 GRM5P41594 1212 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 SLC25A11Q02978 314 aaKnown RBP16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 CAV1Q03135 178 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 ZNF268Q14587 947 aaPredicted RBP16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 SMTNL2Q2TAL5 461 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 TFDP3Q5H9I0 405 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 SRLQ86TD4 932 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 MDM1Q8TC05 714 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 METTL5Q9NRN9 209 aaKnown RBP16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 SNTG2Q9NY99 539 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 ZNF148Q9UQR1 794 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 RRP15Q9Y3B9 282 aaKnown RBP16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 PLXNB2O15031 1838 aa16.77■□□□□ 0.27
CCDC144A-202ENST00000340621 MGAMO43451 1857 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 SCN4AP35499 1836 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 SLC15A5A6NIM6 579 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 GPR32O75388 356 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 HMGCRP04035 888 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 ZSCAN5DPP0CG00 497 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 CYP3A5P20815 502 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 IRX5P78411 483 aaPredicted RBP16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 INCA1Q0VD86 236 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 POLNQ7Z5Q5 900 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 HAUS1Q96CS2 278 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 ZMAT2Q96NC0 199 aaKnown RBP16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 WDR35Q9P2L0 1181 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 CPA4Q9UI42 421 aa16.76■□□□□ 0.27
CCDC144A-202ENST00000340621 RRN3P2A6NIE6 340 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms