RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RPL10AP62906 217 aaKnown RBP14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 TNNC1P63316 161 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 PRKCQQ04759 706 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 ENPEPQ07075 957 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 TRPC3Q13507 836 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 TAF12Q16514 161 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 ARHGAP15Q53QZ3 475 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 CWF19L1Q69YN2 538 aaKnown RBP14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 C4orf50Q6ZRC1 276 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 DNAJB7Q7Z6W7 309 aaPredicted RBP14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 LRRTM3Q86VH5 581 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 FLCNQ8NFG4 579 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 SHKBP1Q8TBC3 707 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 FAM200AQ8TCP9 573 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 DEPDC1BQ8WUY9 529 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 CEP295NLQ96MC4 621 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 GCNAQ96QF7 691 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 VRTNQ9H8Y1 702 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 CDH9Q9ULB4 789 aa14.29□□□□□ -0.12
SIRPB3P-201ENST00000340424 KRBA1A5PL33 1030 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 SOBPA7XYQ1 873 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 IKBKBO14920 756 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 PHACTR2O75167 634 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 MOSPD3O75425 235 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 NPR3P17342 541 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 ATF6P18850 670 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 FCARP24071 287 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 WEE1P30291 646 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 DEKP35659 375 aaKnown RBP14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 GPC5P78333 572 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 FAM160A1Q05DH4 1040 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 TEAD2Q15562 447 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 FAM78AQ5JUQ0 283 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 TTC9BQ8N6N2 239 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 TMEM105Q8N8V8 129 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 ZSCAN18Q8TBC5 510 aaPredicted RBP14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 TMC2Q8TDI7 906 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 DNASE1L2Q92874 299 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 TIGD1Q96MW7 591 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 MMS19Q96T76 1030 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 PKMYT1Q99640 499 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 KXD1Q9BQD3 176 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 RPP25Q9BUL9 199 aaKnown RBP14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 SLITRK6Q9H5Y7 841 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 UXTQ9UBK9 157 aaPredicted RBP14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 CA14Q9ULX7 337 aa14.28□□□□□ -0.12
SIRPB3P-201ENST00000340424 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 CSH1P0DML2 217 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 CSH2P0DML3 217 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 PSMC3P17980 439 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 DDX6P26196 483 aaKnown RBP eCLIP14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 MAGEA11P43364 429 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 STARD6P59095 220 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 BIRC3Q13489 604 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 WDR72Q3MJ13 1102 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 TANGO2Q6ICL3 276 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 FAM171BQ6P995 826 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 SPATA2LQ8IUW3 424 aaPredicted RBP14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 ELOA2Q8IYF1 753 aaPredicted RBP14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 PRSS33Q8NF86 280 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 TAF4BQ92750 862 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 IRF7Q92985 503 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 FAM84AQ96KN4 292 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 GSDMAQ96QA5 445 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 LPIN3Q9BQK8 851 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 SYT15Q9BQS2 421 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 TRMT61BQ9BVS5 477 aaKnown RBP14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 SNX25Q9H3E2 840 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 ATXN3LQ9H3M9 355 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 TBC1D17Q9HA65 648 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 OBP2AQ9NY56 170 aa14.27□□□□□ -0.13
SIRPB3P-201ENST00000340424 LRRIQ3A6PVS8 624 aaPredicted RBP14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 SOAT2O75908 522 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 SMC2O95347 1197 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 CST3P01034 146 aaPredicted RBP14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 P4HA1P13674 534 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 NR2F2P24468 414 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 ACAT1P24752 427 aaKnown RBP14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 GABRR2P28476 465 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 NHLH1Q02575 133 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 MLF2Q15773 248 aaPredicted RBP14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 COBLL1Q53SF7 1204 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 VSTM1Q6UX27 236 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 GAREM2Q75VX8 874 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 OSTM1Q86WC4 334 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 MFSD6LQ8IWD5 586 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 ENGASEQ8NFI3 743 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF516Q92618 1163 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZSWIM3Q96MP5 696 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms