RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 HTRA4P83105 476 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 PTP4A2Q12974 167 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 TCEAL1Q15170 157 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 STILQ15468 1287 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 DENND1BQ6P3S1 775 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 MON1BQ7L1V2 547 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 BCL7CQ8WUZ0 217 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 CPA5Q8WXQ8 436 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 HERVK_113Q902F9 699 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 THAP2Q9H0W7 228 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PDCL3Q9H2J4 239 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 TSPAN16Q9UKR8 245 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 NLRC5Q86WI3 1866 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PTPRDP23468 1912 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 A0A0A6YYK5 440 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 TRAPPC3O43617 180 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 ATP2C2O75185 946 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 OAZ2O95190 189 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 GJB5O95377 273 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 MMP8P22894 467 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 PBX3P40426 434 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 GPD2P43304 727 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PTPN14Q15678 1187 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PPP1R2P3Q6NXS1 205 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 MCOLN2Q8IZK6 566 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 C1orf131Q8NDD1 294 aaKnown RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 VCPIP1Q96JH7 1222 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PKMYT1Q99640 499 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 ACBD6Q9BR61 282 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 GPR62Q9BZJ7 368 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 CRTAC1Q9NQ79 661 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 CYTH4Q9UIA0 394 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 CDH9Q9ULB4 789 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 ZMYND8Q9ULU4 1186 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 GUCA1BQ9UMX6 200 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 NCANO14594 1321 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FAM170AA1A519 330 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 NT5C1B-RDH14C9J2C7 533 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FANCGO15287 622 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 CCDC130P13994 396 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 PTPN1P18031 435 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 ABCB4P21439 1286 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FGFR3P22607 806 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 TKTP29401 623 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 NSFP46459 744 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 ALDH7A1P49419 539 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 PSMC1P62191 440 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 YWHAHQ04917 246 aaPredicted RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 MRPL58Q14197 206 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 FAM117BQ6P1L5 589 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FAM171BQ6P995 826 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 TTC30AQ86WT1 665 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 METTL23Q86XA0 190 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 RNF168Q8IYW5 571 aaPredicted RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 RNF10Q8N5U6 811 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 TMEM35BQ8NCS4 154 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 CTNNBL1Q8WYA6 563 aaPredicted RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 ARHGEF26Q96DR7 871 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 DNAI2Q9GZS0 605 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FAM49BQ9NUQ9 324 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 MYO1AQ9UBC5 1043 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 SF3B1O75533 1304 aaKnown RBP eCLIP8.3□□□□□ -1.08
TMC1-202ENST00000340019 LINC00271P0C7V0 271 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 PCSK1P29120 753 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 GPC5P78333 572 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 CCDC142Q17RM4 750 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 GOLGA7BQ2TAP0 167 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 OVOS1Q6IE37 1185 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FUT10Q6P4F1 479 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 PAQR9Q6ZVX9 377 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 FUKQ8N0W3 1084 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 OR10T2Q8NGX3 314 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 HNRNPABQ99729 332 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 SYT15Q9BQS2 421 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 GTF3C4Q9UKN8 822 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 CEP83Q9Y592 693 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 PAXBP1Q9Y5B6 917 aa8.3□□□□□ -1.08
TMC1-202ENST00000340019 MRPL42Q9Y6G3 142 aaKnown RBP8.3□□□□□ -1.08
TMC1-202ENST00000340019 RANBP2P49792 3224 aaKnown RBP8.29□□□□□ -1.08
TMC1-202ENST00000340019 MACROD2A1Z1Q3 448 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 MYBPHLA2RUH7 354 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 CCDC85CA6NKD9 419 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 M0QYV0 167 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 KIF5CO60282 957 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 TUBB4AP04350 444 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 CYP1A2P05177 515 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 MYBL1P10243 752 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 BTG3Q14201 252 aaPredicted RBP8.29□□□□□ -1.08
TMC1-202ENST00000340019 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
TMC1-202ENST00000340019 FAM171A1Q5VUB5 890 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 KCNT2Q6UVM3 1135 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 ANKRD52Q8NB46 1076 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 UBA3Q8TBC4 463 aa8.29□□□□□ -1.08
TMC1-202ENST00000340019 MYCBPAPQ8TBZ2 947 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms