RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ATP2C2O75185 946 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 CYP11B1P15538 503 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 GNA15P30679 374 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 PDE6CP51160 858 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 ERVFC1P60507 584 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 PSMC1P62191 440 aaKnown RBP19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 CDK17Q00537 523 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 ARID5AQ03989 594 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 CAMK1Q14012 370 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 SMC1AQ14683 1233 aaKnown RBP19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 SGO2Q562F6 1265 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 ARHGAP17Q68EM7 881 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 CCDC186Q7Z3E2 898 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 ZNF677Q86XU0 584 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 MYCBPAPQ8TBZ2 947 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 TMEM209Q96SK2 561 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 TCF25Q9BQ70 676 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 ACP6Q9NPH0 428 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 ENTPD7Q9NQZ7 604 aa19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 NOCTQ9UK39 431 aaKnown RBP19.01■□□□□ 0.63
SDCBP2-201ENST00000339987 MYBPHLA2RUH7 354 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 CXCL14O95715 111 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 SERPING1P05155 500 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 CD19P15391 556 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 FECHP22830 423 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 KLHL30Q0D2K2 578 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 SMARCB1Q12824 385 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 STILQ15468 1287 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 MDH1BQ5I0G3 518 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 HGSNATQ68CP4 663 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 WDR59Q6PJI9 974 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 RSPO2Q6UXX9 243 aaPredicted RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 NOP9Q86U38 636 aaKnown RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 AUTS2Q8WXX7 1259 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 TFAP2BQ92481 460 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 DDX1Q92499 740 aaKnown RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 CLSTN3Q9BQT9 956 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 GTF3C4Q9UKN8 822 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 CDY1Q9Y6F8 540 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 EPOPA6NHQ4 379 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 O00370 1275 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 THAP12O43422 761 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 MED7O43513 233 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 BRD2P25440 801 aaKnown RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 NDUFV1P49821 464 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 GPR17Q13304 367 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 CNGA2Q16280 664 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 NFE2Q16621 373 aaPredicted RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 LRRTM3Q86VH5 581 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 GPIHBP1Q8IV16 184 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 MRPL43Q8N983 215 aaKnown RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 C12orf29Q8N999 325 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 ZNF606Q8WXB4 792 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 HNRNPABQ99729 332 aaKnown RBP19■□□□□ 0.63
SDCBP2-201ENST00000339987 ZSWIM1Q9BR11 485 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 SYT11Q9BT88 431 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 ZNF576Q9H609 170 aa19■□□□□ 0.63
SDCBP2-201ENST00000339987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 C2orf71A6NGG8 1288 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 ADAM12O43184 909 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 CALCAP01258 141 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 OR4Q2P0C623 313 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 RPL17P18621 184 aaKnown RBP18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 OR1D2P34982 312 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 CDR2Q01850 454 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 ROR1Q01973 937 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 RAB33AQ14088 237 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 SLC39A12Q504Y0 691 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 PLPP4Q5VZY2 271 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 LCLAT1Q6UWP7 414 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 C4orf50Q6ZRC1 276 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 GDPD5Q8WTR4 605 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 MYLPFQ96A32 169 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 CYFIP2Q96F07 1278 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 PCED1BQ96HM7 432 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 LPIN3Q9BQK8 851 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 HAUS4Q9H6D7 363 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 FAM49BQ9NUQ9 324 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 TMLHEQ9NVH6 421 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 PCDHGC3Q9UN70 934 aa18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.99■□□□□ 0.63
SDCBP2-201ENST00000339987 COL4A4P53420 1690 aaPredicted RBP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 SSU72P8A0A1W2PR75 194 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 TEX28O15482 410 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 LPXNO60711 386 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 CNPP09543 421 aaKnown RBP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 SKILP12757 684 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 CPB1P15086 417 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 ANXA13P27216 316 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 MAPK8IP2Q13387 824 aaPredicted RBP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 CCDC142Q17RM4 750 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 TDRD12Q587J7 1177 aaKnown RBP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 PPP1R26Q5T8A7 1209 aaPredicted RBP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 TPGS2Q68CL5 300 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 FUKQ8N0W3 1084 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 C2orf15Q8WU43 125 aaKnown RBP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 SLC20A1Q8WUM9 679 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 FUBP3Q96I24 572 aaKnown RBP eCLIP18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 AGPAT1Q99943 283 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 EMILIN2Q9BXX0 1053 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms