RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 VNN1O95497 513 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 PDGFRBP09619 1106 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 HAPLN1P10915 354 aaPredicted RBP12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 MXI1P50539 228 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 PMS1P54277 932 aaKnown RBP12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 DCAF17Q5H9S7 520 aaPredicted RBP12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 WDR44Q5JSH3 913 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 MTSS1LQ765P7 747 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 FRMD5Q7Z6J6 570 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 LRRTM3Q86VH5 581 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 OSTM1Q86WC4 334 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 MLKLQ8NB16 471 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 FEZF2Q8TBJ5 459 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 KBTBD7Q8WVZ9 684 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 EDAQ92838 391 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 FGF13Q92913 245 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 GCNAQ96QF7 691 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 MYADMQ96S97 322 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 GPR88Q9GZN0 384 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 GDE1Q9NZC3 331 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 CEP72Q9P209 647 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 MAGEC2Q9UBF1 373 aaPredicted RBP12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 PRR33A8MZF0 331 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 VNN2O95498 520 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 ASS1P00966 412 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 MYL4P12829 197 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 BMP6P22004 513 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 MCCD1P59942 119 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 ZXDAP98168 799 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 PPP3CAQ08209 521 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 CETN1Q12798 172 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 TDGQ13569 410 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 CFAP221Q4G0U5 840 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 C1orf220Q5T0J3 134 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 PSMG2Q969U7 264 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 FAXDC2Q96IV6 333 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 TNIP3Q96KP6 325 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 PI4K2AQ9BTU6 479 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 CRISPLD1Q9H336 500 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 KCNK12Q9HB15 430 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 RWDD2AQ9UIY3 292 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 ATP8B3O60423 1300 aa12.09□□□□□ -0.47
SLC28A1-202ENST00000338602 MYBPHLA2RUH7 354 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 MBD3O95983 291 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 CSH1P0DML2 217 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 CSH2P0DML3 217 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 CCDC192P0DO97 292 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 LMO2P25791 158 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 ANXA13P27216 316 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 CDC25CP30307 473 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 MAGEA11P43364 429 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 EPHA5P54756 1037 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 STX17P56962 302 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 NOP14P78316 857 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 CYP27A1Q02318 531 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 ARHGAP15Q53QZ3 475 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 VSTM1Q6UX27 236 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 SCARA5Q6ZMJ2 495 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 TTC39CQ8N584 583 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 MYCBPAPQ8TBZ2 947 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 ING5Q8WYH8 240 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 MCRS1Q96EZ8 462 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 CEP295NLQ96MC4 621 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 SMYD3Q9H7B4 428 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 TMLHEQ9NVH6 421 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 RAB20Q9NX57 234 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 EHD2Q9NZN4 543 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 TSC2P49815 1807 aa12.08□□□□□ -0.48
SLC28A1-202ENST00000338602 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 ATP2C2O75185 946 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 SOAT2O75908 522 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 ASGR2P07307 311 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 CYP2F1P24903 491 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 GRIK1P39086 918 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 CDH8P55286 799 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 PSMC1P62191 440 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 FOXK2Q01167 660 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 SIGLEC14Q08ET2 396 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 MDH1BQ5I0G3 518 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 UNC93AQ86WB7 457 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 SCN4BQ8IWT1 228 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 NPAS3Q8IXF0 933 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 HS6ST3Q8IZP7 471 aa12.07□□□□□ -0.48
SLC28A1-202ENST00000338602 TTC9BQ8N6N2 239 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms