RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 DNAJC24Q6P3W2 148 aa27.53■■■□□ 2
ATF4-201ENST00000337304 FBXO38Q6PIJ6 1188 aa27.53■■■□□ 2
ATF4-201ENST00000337304 ADGRF2Q8IZF7 708 aa27.53■■■□□ 2
ATF4-201ENST00000337304 PDCL2Q8N4E4 241 aa27.53■■■□□ 2
ATF4-201ENST00000337304 C3orf20Q8ND61 904 aa27.53■■■□□ 2
ATF4-201ENST00000337304 LINC01599Q8WXQ3 324 aa27.53■■■□□ 2
ATF4-201ENST00000337304 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.53■■■□□ 23e-13■■□□□ 12.4
ATF4-201ENST00000337304 SNX25Q9H3E2 840 aa27.53■■■□□ 2
ATF4-201ENST00000337304 C9IYK1 514 aa27.53■■■□□ 2
ATF4-201ENST00000337304 PROSCO94903 275 aa27.53■■■□□ 2
ATF4-201ENST00000337304 POMCP01189 267 aa27.53■■■□□ 2
ATF4-201ENST00000337304 RPL7AP62424 266 aaKnown RBP27.53■■■□□ 2
ATF4-201ENST00000337304 GOLGA7BQ2TAP0 167 aa27.53■■■□□ 2
ATF4-201ENST00000337304 PPP1R15BQ5SWA1 713 aa27.53■■■□□ 2
ATF4-201ENST00000337304 CRYBG2Q8N1P7 616 aa27.53■■■□□ 2
ATF4-201ENST00000337304 FAM49BQ9NUQ9 324 aa27.53■■■□□ 2
ATF4-201ENST00000337304 PCDHA3Q9Y5H8 950 aa27.53■■■□□ 2
ATF4-201ENST00000337304 TMEM191CA6NGB0 347 aa27.52■■■□□ 2
ATF4-201ENST00000337304 PGRMC1O00264 195 aaKnown RBP27.52■■■□□ 2
ATF4-201ENST00000337304 CYB561D2O14569 222 aa27.52■■■□□ 2
ATF4-201ENST00000337304 PFKMP08237 780 aa27.52■■■□□ 2
ATF4-201ENST00000337304 PDGFRBP09619 1106 aa27.52■■■□□ 2
ATF4-201ENST00000337304 WARSP23381 471 aaKnown RBP27.52■■■□□ 2
ATF4-201ENST00000337304 RPL9P32969 192 aaKnown RBP27.52■■■□□ 2
ATF4-201ENST00000337304 SLC1A1P43005 524 aa27.52■■■□□ 2
ATF4-201ENST00000337304 PDCLQ13371 301 aa27.52■■■□□ 2
ATF4-201ENST00000337304 BFSP2Q13515 415 aa27.52■■■□□ 2
ATF4-201ENST00000337304 C18orf8Q96DM3 657 aa27.52■■■□□ 2
ATF4-201ENST00000337304 LPIN3Q9BQK8 851 aa27.52■■■□□ 2
ATF4-201ENST00000337304 RNF216Q9NWF9 866 aaPredicted RBP27.52■■■□□ 2
ATF4-201ENST00000337304 TTC7AQ9ULT0 858 aaPredicted RBP27.52■■■□□ 2
ATF4-201ENST00000337304 CCDC66A2RUB6 948 aa27.51■■■□□ 2
ATF4-201ENST00000337304 CASTOR2A6NHX0 329 aa27.51■■■□□ 2
ATF4-201ENST00000337304 ERBB2P04626 1255 aa27.51■■■□□ 2
ATF4-201ENST00000337304 OSTM1Q86WC4 334 aa27.51■■■□□ 2
ATF4-201ENST00000337304 C3orf58Q8NDZ4 430 aa27.51■■■□□ 2
ATF4-201ENST00000337304 PNKPQ96T60 521 aa27.51■■■□□ 2
ATF4-201ENST00000337304 PAAF1Q9BRP4 392 aa27.51■■■□□ 2
ATF4-201ENST00000337304 TMEM59LQ9UK28 342 aa27.51■■■□□ 2
ATF4-201ENST00000337304 GABRB2P47870 512 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 GSCP56915 257 aaPredicted RBP27.51■■□□□ 1.99
ATF4-201ENST00000337304 GRIK3Q13003 919 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 ZNF211Q13398 564 aaPredicted RBP27.51■■□□□ 1.99
ATF4-201ENST00000337304 UPP1Q16831 310 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 PKDCCQ504Y2 493 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 ARHGAP17Q68EM7 881 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 SLC24A5Q71RS6 500 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 SENP8Q96LD8 212 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 RNPC3Q96LT9 517 aaKnown RBP27.51■■□□□ 1.99
ATF4-201ENST00000337304 MCEEQ96PE7 176 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 INPP5FQ9Y2H2 1132 aa27.51■■□□□ 1.99
ATF4-201ENST00000337304 TTC30AQ86WT1 665 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 XYLT1Q86Y38 959 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 INPPL1O15357 1258 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 NBNO60934 754 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 FAM163BP0C2L3 166 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 PSMC1P62191 440 aaKnown RBP27.5■■□□□ 1.99
ATF4-201ENST00000337304 TAP1Q03518 808 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 GPNMBQ14956 572 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 WSCD1Q658N2 575 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 SYNCQ9H7C4 482 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 IP6K2Q9UHH9 426 aa27.5■■□□□ 1.99
ATF4-201ENST00000337304 EOMESO95936 686 aa27.49■■□□□ 1.99
ATF4-201ENST00000337304 FAM189BP81408 668 aa27.49■■□□□ 1.99
ATF4-201ENST00000337304 ZNF268Q14587 947 aaPredicted RBP27.49■■□□□ 1.99
ATF4-201ENST00000337304 DCUN1D2Q6PH85 259 aa27.49■■□□□ 1.99
ATF4-201ENST00000337304 FTHL17Q9BXU8 183 aa27.49■■□□□ 1.99
ATF4-201ENST00000337304 WDR35Q9P2L0 1181 aa27.49■■□□□ 1.99
ATF4-201ENST00000337304 ZNF252P-AS1Q0IIN9 211 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 DAB2IPQ5VWQ8 1189 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.48■■□□□ 1.99
ATF4-201ENST00000337304 RAB21Q9UL25 225 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 SIGLEC16A6NMB1 481 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 GOLGA8SH3BPF8 625 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 PITPNM1O00562 1244 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 GABRDO14764 452 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 PQBP1O60828 265 aaKnown RBP27.48■■□□□ 1.99
ATF4-201ENST00000337304 FGGP02679 453 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 MAN1A1P33908 653 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 MNX1P50219 401 aaPredicted RBP27.48■■□□□ 1.99
ATF4-201ENST00000337304 OGDHQ02218 1023 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 AADACL2Q6P093 401 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 LRRC1Q9BTT6 524 aa27.48■■□□□ 1.99
ATF4-201ENST00000337304 CCDC130P13994 396 aa27.47■■□□□ 1.99
ATF4-201ENST00000337304 AARSP49588 968 aaKnown RBP eCLIP27.47■■□□□ 1.99
ATF4-201ENST00000337304 TUSC3Q13454 348 aa27.47■■□□□ 1.99
ATF4-201ENST00000337304 TNIP3Q96KP6 325 aa27.47■■□□□ 1.99
ATF4-201ENST00000337304 DNAI2Q9GZS0 605 aa27.47■■□□□ 1.99
ATF4-201ENST00000337304 ST7Q9NRC1 585 aa27.47■■□□□ 1.99
ATF4-201ENST00000337304 HESX1Q9UBX0 185 aa27.47■■□□□ 1.99
ATF4-201ENST00000337304 TULP2O00295 520 aa27.46■■□□□ 1.99
ATF4-201ENST00000337304 PYGMP11217 842 aa27.46■■□□□ 1.99
ATF4-201ENST00000337304 ATN1P54259 1190 aaPredicted RBP27.46■■□□□ 1.99
ATF4-201ENST00000337304 RWDD2BP57060 319 aa27.46■■□□□ 1.99
ATF4-201ENST00000337304 MCRS1Q96EZ8 462 aa27.46■■□□□ 1.99
ATF4-201ENST00000337304 DDX27Q96GQ7 796 aaKnown RBP27.46■■□□□ 1.99
ATF4-201ENST00000337304 AP1M1Q9BXS5 423 aa27.46■■□□□ 1.99
ATF4-201ENST00000337304 CRISPLD2Q9H0B8 497 aa27.46■■□□□ 1.99
ATF4-201ENST00000337304 TARSL2A2RTX5 802 aaKnown RBP27.46■■□□□ 1.99
ATF4-201ENST00000337304 SETSIPP0DME0 302 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms