RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 CEP55Q53EZ4 464 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 C2CD6Q53TS8 623 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 CDC42EP5Q6NZY7 148 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 NLRX1Q86UT6 975 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 OLFM3Q96PB7 478 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 ACSS3Q9H6R3 686 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 MRPL47Q9HD33 250 aaKnown RBP17.08■□□□□ 0.32
UPK3B-202ENST00000334348 PCDHB2Q9Y5E7 798 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.08■□□□□ 0.32
UPK3B-202ENST00000334348 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 DENND3A2RUS2 1198 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 NDUFB10O96000 172 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 MYL2P10916 166 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 KRT10P13645 584 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 GLRA2P23416 452 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 SH3BGRP55822 239 aaPredicted RBP17.07■□□□□ 0.32
UPK3B-202ENST00000334348 C6orf163Q5TEZ5 329 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 KAZNQ674X7 775 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 SCUBE1Q8IWY4 988 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 STKLD1Q8NE28 680 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 PYROXD1Q8WU10 500 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 DCAKDQ8WVC6 231 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 RPGRQ92834 1020 aaKnown RBP17.07■□□□□ 0.32
UPK3B-202ENST00000334348 NMUR2Q9GZQ4 415 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 NDE1Q9NXR1 346 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 ATXN10Q9UBB4 475 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 ZNFX1Q9P2E3 1918 aaKnown RBP17.07■□□□□ 0.32
UPK3B-202ENST00000334348 BANF1O75531 89 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 CIB2O75838 187 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 PENKP01210 267 aaPredicted RBP17.07■□□□□ 0.32
UPK3B-202ENST00000334348 ARP10275 920 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 SSTR1P30872 391 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 GTF2H1P32780 548 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 ETV4P43268 484 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 ACTR3P61158 418 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 MAMLD1Q13495 774 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 RIPOR1Q6ZS17 1223 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 RFX8Q6ZV50 586 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 TMC2Q8TDI7 906 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 SLITRK1Q96PX8 696 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 PCDH9Q9HC56 1237 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 GPAMQ9HCL2 828 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 PLA2G4CQ9UP65 541 aa17.07■□□□□ 0.32
UPK3B-202ENST00000334348 CAPN14A8MX76 684 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 LPXNO60711 386 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 TM7SF2O76062 418 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 HNRNPDQ14103 355 aaKnown RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 C3orf62Q6ZUJ4 267 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 MARK2Q7KZI7 788 aaKnown RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 PCGF5Q86SE9 256 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 ELMO3Q96BJ8 720 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 KLF6Q99612 283 aaPredicted RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 TOPORSQ9NS56 1045 aaPredicted RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 ARMCX1Q9P291 453 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 C2orf71A6NGG8 1288 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 CFBP00751 764 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 NFIAQ12857 509 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 CDC16Q13042 620 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 ST13P4Q8IZP2 240 aaPredicted RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 RBM15BQ8NDT2 890 aaKnown RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 NKD2Q969F2 451 aaPredicted RBP17.06■□□□□ 0.32
UPK3B-202ENST00000334348 PANX3Q96QZ0 392 aa17.06■□□□□ 0.32
UPK3B-202ENST00000334348 H3BRJ5 948 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 MT-ND3P03897 115 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 ITGAVP06756 1048 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 BGNP21810 368 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 CPA2P48052 419 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 BPIFB4P59827 614 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 ATP13A4Q4VNC1 1196 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 TMCO4Q5TGY1 634 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 CIAPIN1Q6FI81 312 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 PLEKHA7Q6IQ23 1121 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 MFSD7Q6UXD7 560 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 ZFPM1Q8IX07 1006 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 VCPIP1Q96JH7 1222 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 MIS12Q9H081 205 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 OCEL1Q9H607 264 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 KLHL11Q9NVR0 708 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 STRIP2Q9ULQ0 834 aa17.05■□□□□ 0.32
UPK3B-202ENST00000334348 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
UPK3B-202ENST00000334348 FAM237BA0A1B0GVD1 139 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 GOLGA8SH3BPF8 625 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 GOLGA8MH3BSY2 632 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 KLF11O14901 512 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 TLR3O15455 904 aaKnown RBP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 RNASEH1O60930 286 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms