RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 B8ZZF3 427 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 MPZL2O60487 215 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 RAD17O75943 681 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 USP1O94782 785 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 GARNL3Q5VVW2 1013 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 GTF2H5Q6ZYL4 71 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SVOPQ8N4V2 548 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 LRRC17Q8N6Y2 441 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF597Q96LX8 424 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPP3R2Q96LZ3 170 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 XPO4Q9C0E2 1151 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 EPN3Q9H201 632 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 LNPEPQ9UIQ6 1025 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CLCA1A8K7I4 914 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 K7ENM7 598 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHRM1P11229 460 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ITGALP20701 1170 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 RAB7AP51149 207 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ABRQ12979 859 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ITGA7Q13683 1181 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 LIX1Q8N485 282 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 INTS4Q96HW7 963 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SUCLG2Q96I99 432 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 KCNK16Q96T55 309 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 GANQ9H2C0 597 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CUEDC2Q9H467 287 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 MARCH7Q9H992 704 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 INTS10Q9NVR2 710 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SYCP2Q9BX26 1530 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PTCD1O75127 700 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 AFPP02771 609 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 RB1P06400 928 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 GDI1P31150 447 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 COPZ1P61923 177 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHRNA6Q15825 494 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 RHOUQ7L0Q8 258 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 VANGL1Q8TAA9 524 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 POF1BQ8WVV4 589 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 OR10A4Q9H209 315 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ETNK1Q9HBU6 452 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NEUROD4Q9HD90 331 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRPM5Q9NZQ8 1165 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRPV2Q9Y5S1 764 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPM1BO75688 479 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 IFNA10P01566 189 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 IFNA4P05014 189 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NCAM1P13591 858 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 RFX3P48380 749 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 IQUBQ8NA54 791 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ITPKCQ96DU7 683 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 DGKBQ9Y6T7 804 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRPM2O94759 1503 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 UBE2QL1A1L167 161 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 MICAL2O94851 1124 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNTTP04053 509 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATF7P17544 494 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NOS2P35228 1153 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 VMACQ2NL98 169 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PIGOQ8TEQ8 1089 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATXN3LQ9H3M9 355 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 WDR26Q9H7D7 661 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCDC194A0A1B0GVG4 234 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 AKAP10O43572 662 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 DENRO43583 198 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SOAT1P35610 550 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 C1DQ13901 141 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SHROOM1Q2M3G4 852 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 FASTKD1Q53R41 847 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SPDYAQ5MJ70 313 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PEG10Q86TG7 708 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 MLKLQ8NB16 471 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRPV3Q8NET8 790 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 UPB1Q9UBR1 384 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NPIPA2E9PIF3 369 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 MDM4O15151 490 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TGM4P49221 684 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 C2orf54Q08AI8 447 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRKD1Q15139 912 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC9A4Q6AI14 798 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF544Q6NX49 715 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNAJC14Q6Y2X3 702 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RIC3Q7Z5B4 369 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRUNE1Q86TP1 453 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM228AQ86W67 206 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ASB15Q8WXK1 588 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TUBGCP5Q96RT8 1024 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTYH1Q9H313 450 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 BICC1Q9H694 974 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAGEE1Q9HCI5 957 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DDX25Q9UHL0 483 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ARAP3Q8WWN8 1544 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHEK2O96017 543 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 NR4A1P22736 598 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GTF2IP78347 998 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DPP8Q6V1X1 898 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RBBP8NLQ8NC74 664 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms