RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PAPLNO95428 1278 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 UCHL3P15374 230 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 PTPN1P18031 435 aaKnown RBP17.1■□□□□ 0.33
LRRC28-202ENST00000331450 PBX1P40424 430 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 ZNF132P52740 706 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 RAD23BP54727 409 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 MFAP3P55082 362 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 UBASH3AP57075 661 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 IQCEQ6IPM2 695 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 SARM1Q6SZW1 724 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 ACOT1Q86TX2 421 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 MYCBPAPQ8TBZ2 947 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 PABPC5Q96DU9 382 aaKnown RBP17.1■□□□□ 0.33
LRRC28-202ENST00000331450 TNIP3Q96KP6 325 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 NT5C1AQ9BXI3 368 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 CRISPLD1Q9H336 500 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 HSFX1Q9UBD0 423 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 DNAJC12Q9UKB3 198 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 GTF3C4Q9UKN8 822 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 DAAM1Q9Y4D1 1078 aa17.1■□□□□ 0.33
LRRC28-202ENST00000331450 MYH10P35580 1976 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 AP5Z1O43299 807 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 NCK2O43639 380 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 SEC24AO95486 1093 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 LTBRP36941 435 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 ORC1Q13415 861 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 MAPRE1Q15691 268 aaKnown RBP17.09■□□□□ 0.33
LRRC28-202ENST00000331450 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
LRRC28-202ENST00000331450 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 LLGL2Q6P1M3 1020 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 TCEAL8Q8IYN2 117 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 TTC9BQ8N6N2 239 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 KREMEN2Q8NCW0 462 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 SPPL2BQ8TCT7 592 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 C2orf15Q8WU43 125 aaKnown RBP17.09■□□□□ 0.33
LRRC28-202ENST00000331450 CASP10Q92851 521 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 MYLPFQ96A32 169 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 LPIN3Q9BQK8 851 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 XPO4Q9C0E2 1151 aaKnown RBP17.09■□□□□ 0.33
LRRC28-202ENST00000331450 GPR88Q9GZN0 384 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 MAN1C1Q9NR34 630 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 FAM207AQ9NSI2 230 aaPredicted RBP17.09■□□□□ 0.33
LRRC28-202ENST00000331450 OBSL1O75147 1896 aa17.09■□□□□ 0.33
LRRC28-202ENST00000331450 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.32
LRRC28-202ENST00000331450 SPATA31D3P0C874 917 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 CCDC85BQ15834 202 aaPredicted RBP17.08■□□□□ 0.32
LRRC28-202ENST00000331450 CFAP221Q4G0U5 840 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 ZNF394Q53GI3 561 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 MDH1BQ5I0G3 518 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 TMEM270Q6UE05 265 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 SPATA31D4Q6ZUB0 917 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 ATAD1Q8NBU5 361 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.32
LRRC28-202ENST00000331450 MAFAQ8NHW3 353 aaPredicted RBP17.08■□□□□ 0.32
LRRC28-202ENST00000331450 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
LRRC28-202ENST00000331450 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 DZANK1Q9NVP4 752 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 CLEC1BQ9P126 229 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 PCDHB4Q9Y5E5 795 aa17.08■□□□□ 0.32
LRRC28-202ENST00000331450 PAEPP09466 180 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 HOXA9P31269 272 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 JAM2P57087 298 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 DLX2Q07687 328 aaPredicted RBP17.07■□□□□ 0.32
LRRC28-202ENST00000331450 ARHGAP44Q17R89 818 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 PAQR9Q6ZVX9 377 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 RTL10Q7L3V2 364 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 C12orf29Q8N999 325 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 SLC7A14Q8TBB6 771 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 B3GNT5Q9BYG0 378 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 CLDND1Q9NY35 253 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 ABI2Q9NYB9 513 aaPredicted RBP17.07■□□□□ 0.32
LRRC28-202ENST00000331450 DPP7Q9UHL4 492 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 INSL5Q9Y5Q6 135 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
LRRC28-202ENST00000331450 ZNF638Q14966 1978 aaKnown RBP17.06■□□□□ 0.32
LRRC28-202ENST00000331450 DENND4CQ5VZ89 1909 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 MYO16Q9Y6X6 1858 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-202ENST00000331450 F8VZ95 297 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 ZMYND10O75800 440 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 C8AP07357 584 aa17.06■□□□□ 0.32
LRRC28-202ENST00000331450 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms