RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 TADA2BQ86TJ2 420 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 EXOC3L1Q86VI1 746 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 KIAA0319LQ8IZA0 1049 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 LINC01465Q8N7H1 131 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 NIPA2Q8N8Q9 360 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 SLC10A4Q96EP9 437 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 TSPYL1Q9H0U9 437 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 SYNCQ9H7C4 482 aa15.68■□□□□ 0.1
CLCNKA-201ENST00000331433 A0A087WUV0 522 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 MED7O43513 233 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 LRCH4O75427 683 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 ERBB2P04626 1255 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 CREB1P16220 341 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 IL1R2P27930 398 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 POLR2BP30876 1174 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 PTPN11Q06124 597 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 LDLRAD1Q5T700 205 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 HIBCHQ6NVY1 386 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 SPATS2Q86XZ4 545 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 PPTC7Q8NI37 304 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 NLRP7Q8WX94 980 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 CENPTQ96BT3 561 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 CHMP6Q96FZ7 201 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 STMN4Q9H169 189 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 LHX5Q9H2C1 402 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 ZNF408Q9H9D4 720 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 INTS9Q9NV88 658 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 SAE1Q9UBE0 346 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 SIGLEC16A6NMB1 481 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 CILPO75339 1184 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 DRD4P21917 467 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 ARSEP51690 589 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 DYNLT1P63172 113 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 MICALCLQ6ZW33 695 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 CPLX4Q7Z7G2 160 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 PRMT1Q99873 361 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 C16orf70Q9BSU1 422 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 METTL5Q9NRN9 209 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
CLCNKA-201ENST00000331433 LOC102724159A0A0B4J2E5 919 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 PDHXO00330 501 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 MAGEB2O15479 319 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 MICAL2O94851 1124 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 IFNAR2P48551 515 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 PLCB3Q01970 1234 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 SLC25A11Q02978 314 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 TNFAIP2Q03169 654 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 PWP2Q15269 919 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 XYLT1Q86Y38 959 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 MICALL1Q8N3F8 863 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 OTUD6BQ8N6M0 293 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 ALLCQ8N6M5 410 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 BBOF1Q8ND07 529 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 ARHGEF2Q92974 986 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 SEC16BQ96JE7 1060 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 L3MBTL3Q96JM7 780 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 RBM15Q96T37 977 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 DDX56Q9NY93 547 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 AGAP1Q9UPQ3 857 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 C5orf60A6NFR6 353 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 M0QYV0 167 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 CETPP11597 493 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 COPS2P61201 443 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 LMNB2Q03252 620 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 POU5F1BQ06416 359 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 SF3A3Q12874 501 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 GPS1Q13098 491 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 CYP4F22Q6NT55 531 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 DRICH1Q6PGQ1 229 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 MTHFD1LQ6UB35 978 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 TAOK1Q7L7X3 1001 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 TMEM176AQ96HP8 235 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 HPDLQ96IR7 371 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 SERPINB12Q96P63 405 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 ZNF317Q96PQ6 595 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 C10orf88Q9H8K7 445 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 VTA1Q9NP79 307 aa15.66■□□□□ 0.1
CLCNKA-201ENST00000331433 ATXN2Q99700 1313 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 ZSWIM8A7E2V4 1837 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 PLXNB2O15031 1838 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 IFNB1P01574 187 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 VCPP55072 806 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 CCNA1P78396 465 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 TMEM132DQ14C87 1099 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 OASLQ15646 514 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 HP1BP3Q5SSJ5 553 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 C6orf89Q6UWU4 347 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 IFNLR1Q8IU57 520 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 ZCCHC9Q8N567 271 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 ASB7Q9H672 318 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 TBK1Q9UHD2 729 aa15.65■□□□□ 0.1
CLCNKA-201ENST00000331433 PCSK1NQ9UHG2 260 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms