RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TFAP2BQ92481 460 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 STRA6Q9BX79 667 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 B3GNT5Q9BYG0 378 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 EDEM3Q9BZQ6 932 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 GTPBP10A4D1E9 387 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 KPNA6O60684 536 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 HNRNPH1P31943 449 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 SNRPFP62306 86 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 CFAP221Q4G0U5 840 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 METTL23Q86XA0 190 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 DPF3Q92784 378 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 OSBPL9Q96SU4 736 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 ALG6Q9Y672 507 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 GPR32O75388 356 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 ASS1P00966 412 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 RDXP35241 583 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 PTPN11Q06124 597 aaPredicted RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 TRIM60Q495X7 471 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 ADGRF2Q8IZF7 708 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 SIX6OS1Q8N1H7 587 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 SHC3Q92529 594 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 HPDP32754 393 aaPredicted RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 MAP3K7CLP57077 242 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 CDC42EP1Q00587 391 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 FMO1Q01740 532 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 PPP1R7Q15435 360 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 RFFLQ8WZ73 363 aa16.78■□□□□ 0.28
PDGFB-201ENST00000331163 DDX43Q9NXZ2 648 aaKnown RBP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDGFB-201ENST00000331163 SCN4AP35499 1836 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 RTN2O75298 545 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 RNF8O76064 485 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 MOCS2O96007 188 aaPredicted RBP16.77■□□□□ 0.28
PDGFB-201ENST00000331163 DESP17661 470 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 KCNJ1P48048 391 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 MARCKSL1P49006 195 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 RPL7AP62424 266 aaKnown RBP16.77■□□□□ 0.28
PDGFB-201ENST00000331163 ATP13A4Q4VNC1 1196 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 BHMTQ93088 406 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 METTL5Q9NRN9 209 aaKnown RBP16.77■□□□□ 0.28
PDGFB-201ENST00000331163 GPATCH2LQ9NWQ4 482 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 MYH10P35580 1976 aa16.77■□□□□ 0.28
PDGFB-201ENST00000331163 P4HA2O15460 535 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 SOX4Q06945 474 aaPredicted RBP16.77■□□□□ 0.27
PDGFB-201ENST00000331163 FMNL3Q8IVF7 1028 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 C18orf8Q96DM3 657 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 SENP8Q96LD8 212 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 ADAMTS10Q9H324 1103 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 SIX4Q9UIU6 781 aa16.77■□□□□ 0.27
PDGFB-201ENST00000331163 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.27
PDGFB-201ENST00000331163 ZNFX1Q9P2E3 1918 aaKnown RBP16.77■□□□□ 0.27
PDGFB-201ENST00000331163 ARL5CA6NH57 179 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 PDE2AO00408 941 aaPredicted RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 HMBSP08397 361 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 KRT3P12035 628 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 CKBP12277 381 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 C12orf56Q8IXR9 622 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 C1orf54Q8WWF1 131 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 TMEM176AQ96HP8 235 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 ASB7Q9H672 318 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 GEMIN8Q9NWZ8 242 aaKnown RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 DAPK3O43293 454 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 CKAP4Q07065 602 aaKnown RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 BSPRYQ5W0U4 402 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 URGCPQ8TCY9 931 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 ARL8AQ96BM9 186 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 SEPT5Q99719 369 aaPredicted RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 SIK2Q9H0K1 926 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 DMGDHQ9UI17 866 aaKnown RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 GRID2IPA4D2P6 1211 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 PODXLO00592 558 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 MED7O43513 233 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 CDCA2Q69YH5 1023 aaPredicted RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 FAM71AQ8IYT1 594 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 GIMAP7Q8NHV1 300 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 ZNF560Q96MR9 790 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
PDGFB-201ENST00000331163 MAK16Q9BXY0 300 aaKnown RBP16.76■□□□□ 0.27
PDGFB-201ENST00000331163 GOLGA6L10A0A0M3HER8 536 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 ADAMTS4O75173 837 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 GRIK1P39086 918 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 SYCE1Q8N0S2 351 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 EDEM1Q92611 657 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 KRT35Q92764 455 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 MAGOHBQ96A72 148 aaKnown RBP16.75■□□□□ 0.27
PDGFB-201ENST00000331163 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 CXorf56Q9H5V9 222 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 MIOSQ9NXC5 875 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDGFB-201ENST00000331163 KRT14P02533 472 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 KRT1P04264 644 aa16.75■□□□□ 0.27
PDGFB-201ENST00000331163 MCM3P25205 808 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms