RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 KCNK13Q9HB14 408 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 ARHGEF4Q9NR80 690 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 K7ENM7 598 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 ANPEPP15144 967 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 EFHC2Q5JST6 749 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 ZBED8Q8IZ13 594 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 TSSK1BQ9BXA7 367 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 ZNF341Q9BYN7 854 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 CHCHD3Q9NX63 227 aaKnown RBP19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 RNF181Q9P0P0 153 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 COMMD3-BMI1R4GMX3 469 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 F8W8V4 182 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 PLA2G6O60733 806 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 DDNO94850 711 aaPredicted RBP19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 HIRAP54198 1017 aaPredicted RBP19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 LSAMPQ13449 338 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 RFX8Q6ZV50 586 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 OTOP1Q7RTM1 612 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 TTC7BQ86TV6 843 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 LRRC6Q86X45 466 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 ZSWIM2Q8NEG5 633 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 TCP10LQ8TDR4 215 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 SEMA4DQ92854 862 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 FAM161BQ96MY7 647 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 C12orf65Q9H3J6 166 aaKnown RBP19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 IL1RAPL1Q9NZN1 696 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 SLC17A7Q9P2U7 560 aa19.03■□□□□ 0.64
CLSTN3-202ENST00000331148 TM9SF1O15321 606 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 PENKP01210 267 aaPredicted RBP19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 ZSCAN5DPP0CG00 497 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 GEMIN4P57678 1058 aaKnown RBP19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 USH1GQ495M9 461 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 PHLDB2Q86SQ0 1253 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 SMC1BQ8NDV3 1235 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 PHACTR1Q9C0D0 580 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 VPS11Q9H270 941 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 AVENQ9NQS1 362 aaPredicted RBP19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 GGA3Q9NZ52 723 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 KCND2Q9NZV8 630 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 WRAP73Q9P2S5 460 aaPredicted RBP19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 TBC1D30Q9Y2I9 924 aa19.02■□□□□ 0.64
CLSTN3-202ENST00000331148 IGLV3-22A0A075B6J6 115 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 ALOX15BO15296 676 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 PMM2O15305 246 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 PSTPIP1O43586 416 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 MAGEC1O60732 1142 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 YBX3P16989 372 aaKnown RBP eCLIP19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 EFTUD2Q15029 972 aaKnown RBP eCLIP19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 FAM160B2Q86V87 743 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 MCOLN2Q8IZK6 566 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 DAW1Q8N136 415 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 HELQQ8TDG4 1101 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 FNBP1Q96RU3 617 aa19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 ALG13Q9NP73 1137 aaKnown RBP19.02■□□□□ 0.63
CLSTN3-202ENST00000331148 FCHO1O14526 889 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 HOXA13P31271 388 aaPredicted RBP19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 PDIA2Q13087 525 aaKnown RBP19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 PRAMEF18Q5VWM3 479 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 LLGL2Q6P1M3 1020 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 MARK2Q7KZI7 788 aaKnown RBP19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 KLHL23Q8NBE8 558 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 XXYLT1Q8NBI6 393 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 OLFM3Q96PB7 478 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 NDE1Q9NXR1 346 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 HSPBP1Q9NZL4 362 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 FEM1BQ9UK73 627 aa19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.01■□□□□ 0.63
CLSTN3-202ENST00000331148 C2orf71A6NGG8 1288 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 LIASO43766 372 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 PROSCO94903 275 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CALCAP01258 141 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CYP3A4P08684 503 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 DLDP09622 509 aaKnown RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 ETS2P15036 469 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CD58P19256 250 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CRABP2P29373 138 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CPA2P48052 419 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 ARSEP51690 589 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 TAS2R40P59535 323 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 GPX6P59796 221 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CDC16Q13042 620 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 GPS1Q13098 491 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 USP4Q13107 963 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 FAM91A1Q658Y4 838 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CENPUQ71F23 418 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 RHOT1Q8IXI2 618 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 KATNAL2Q8IYT4 538 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 BANPQ8N9N5 519 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 CCDC110Q8TBZ0 833 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 DHX38Q92620 1227 aaKnown RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 OXNAD1Q96HP4 312 aaPredicted RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 FAM81BQ96LP2 452 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 NACC1Q96RE7 527 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 WDR18Q9BV38 432 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 RANBP17Q9H2T7 1088 aaKnown RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 TMCO1Q9UM00 188 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 PPP2R3BQ9Y5P8 575 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 PSMD10O75832 226 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 TGDSO95455 350 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms