RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SIGLEC14Q08ET2 396 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 ZBTB6Q15916 424 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 PSMD5Q16401 504 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 RARS2Q5T160 578 aaKnown RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 RRAGBQ5VZM2 374 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 CCDC149Q6ZUS6 474 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 TAS1R1Q7RTX1 841 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 MYCT1Q8N699 235 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 TDRD5Q8NAT2 981 aaKnown RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 RASSF8Q8NHQ8 419 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 LNX1Q8TBB1 728 aaPredicted RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 LRRC15Q8TF66 581 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 AUTS2Q8WXX7 1259 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 RIN2Q8WYP3 895 aaPredicted RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 ACSF2Q96CM8 615 aaPredicted RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 LPIN3Q9BQK8 851 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 ASB7Q9H672 318 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 WDR6Q9NNW5 1121 aaKnown RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 MAN1C1Q9NR34 630 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 ZFATQ9P243 1243 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 SORCS3Q9UPU3 1222 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 GDAQ9Y2T3 454 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 CASTOR2A6NHX0 329 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 K7ENM7 598 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 HNRNPDLO14979 420 aaKnown RBP6.88□□□□□ -1.31
SMG1-201ENST00000330588 SPTLC2O15270 562 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 TGM5O43548 720 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 TBC1D4O60343 1298 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 CUTAO60888 179 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 B3GAT3O94766 335 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 LIG1P18858 919 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 CA8P35219 290 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 AARSP49588 968 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMG1-201ENST00000330588 LIG4P49917 911 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 GRIN1Q05586 938 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 PPP2R3AQ06190 1150 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
SMG1-201ENST00000330588 SLC10A6Q3KNW5 377 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 RTP2Q5QGT7 225 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 FAM171A1Q5VUB5 890 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 TPGS2Q68CL5 300 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 SLC8B1Q6J4K2 584 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 CD300LGQ6UXG3 332 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 STXBP4Q6ZWJ1 553 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 ZNF720Q7Z2F6 126 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 KREMEN2Q8NCW0 462 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 KCNG4Q8TDN1 519 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 DNAJC19Q96DA6 116 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 EPSTI1Q96J88 318 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 USP28Q96RU2 1077 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 CLSTN3Q9BQT9 956 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 TCHPQ9BT92 498 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 TNMDQ9H2S6 317 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMG1-201ENST00000330588 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMG1-201ENST00000330588 STIM2Q9P246 746 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 IGSF9Q9P2J2 1179 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 EPS15L1Q9UBC2 864 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 UBQLN1Q9UMX0 589 aaKnown RBP6.88□□□□□ -1.31
SMG1-201ENST00000330588 EXOC7Q9UPT5 735 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 C2CD2Q9Y426 696 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
SMG1-201ENST00000330588 MYO7AQ13402 2215 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 VWA8A3KMH1 1905 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 CLUHO75153 1309 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 C2orf16Q68DN1 1984 aa6.88□□□□□ -1.31
SMG1-201ENST00000330588 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 C2CD4DB7Z1M9 353 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 F8W810 466 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 M0QZQ0 153 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 PODXLO00592 558 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 XYLBO75191 536 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 MICAL2O94851 1124 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 ABLIM3O94929 683 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 IL18RAPO95256 599 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 LDHAP00338 332 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 KRT18P05783 430 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 ZSCAN22P10073 491 aaPredicted RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 EPB42P16452 691 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 GARTP22102 1010 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 MARCKSP29966 332 aaPredicted RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 IDH3AP50213 366 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 CLCNKBP51801 687 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 SNRPFP62306 86 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 AMPD3Q01432 767 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 SOX4Q06945 474 aaPredicted RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 RAD51AP2Q09MP3 1159 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 LRP8Q14114 963 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 ZRSR1Q15695 479 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 L1TD1Q5T7N2 865 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 FAM35AQ86V20 835 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 CEP120Q8N960 986 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 APPL2Q8NEU8 664 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 BEST2Q8NFU1 509 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 ZNF461Q8TAF7 563 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 ZNF707Q96C28 371 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms