RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TWF2Q6IBS0 349 aaKnown RBP17.93■□□□□ 0.46
DDX41-201ENST00000330503 DCUN1D2Q6PH85 259 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 KATNAL2Q8IYT4 538 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 NEUROG2Q9H2A3 272 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 CASP8AP2Q9UKL3 1982 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 GOLGA8SH3BPF8 625 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 RPS6KA5O75582 802 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 CD4P01730 458 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 RFC1P35251 1148 aaPredicted RBP17.93■□□□□ 0.46
DDX41-201ENST00000330503 AARSP49588 968 aaKnown RBP eCLIP17.93■□□□□ 0.464e-6■■□□□ 13.1
DDX41-201ENST00000330503 GSCP56915 257 aaPredicted RBP17.93■□□□□ 0.46
DDX41-201ENST00000330503 DHX34Q14147 1143 aaKnown RBP17.93■□□□□ 0.46
DDX41-201ENST00000330503 ZNF268Q14587 947 aaPredicted RBP17.93■□□□□ 0.46
DDX41-201ENST00000330503 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 ANKS1BQ7Z6G8 1248 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 RPAINQ86UA6 219 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 RSPH3Q86UC2 560 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 SESTD1Q86VW0 696 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 JOSD2Q8TAC2 188 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 MTUS1Q9ULD2 1270 aa17.93■□□□□ 0.46
DDX41-201ENST00000330503 FAM187AA6NFU0 413 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 M0QZ92 97 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 AGPSO00116 658 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 TOMM70O94826 608 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 CTSHP09668 335 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 COILP38432 576 aaPredicted RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 DUPD1Q68J44 220 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 ACOT1Q86TX2 421 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 NIPA2Q8N8Q9 360 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 C12orf50Q8NA57 414 aaPredicted RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 PLVAPQ9BX97 442 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 GOLGA2P5Q9HBQ8 144 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 SRRDQ9UH36 339 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 PTGESO14684 152 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 MYCNP04198 464 aaPredicted RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 KRT3P12035 628 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 SSR1P43307 286 aaKnown RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 PDCLQ13371 301 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 PPP1R26Q5T8A7 1209 aaPredicted RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 LIMS2Q7Z4I7 341 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 JAMLQ86YT9 394 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 EXD1Q8NHP7 514 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDX41-201ENST00000330503 MCRS1Q96EZ8 462 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 LPIN3Q9BQK8 851 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 ERP44Q9BS26 406 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 LRRC19Q9H756 370 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 GDAP2Q9NXN4 497 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 LCMT1Q9UIC8 334 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 TSPAN16Q9UKR8 245 aa17.92■□□□□ 0.46
DDX41-201ENST00000330503 UTP11Q9Y3A2 253 aaKnown RBP17.92■□□□□ 0.46
DDX41-201ENST00000330503 MEIS3P2A8K0S8 358 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 HCRTO43612 131 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 SYF2O95926 243 aaKnown RBP17.91■□□□□ 0.46
DDX41-201ENST00000330503 FGFR1P11362 822 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 ATF7P17544 494 aaPredicted RBP17.91■□□□□ 0.46
DDX41-201ENST00000330503 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
DDX41-201ENST00000330503 PKDCCQ504Y2 493 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 FBXO47Q5MNV8 452 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 CCDC137Q6PK04 289 aaKnown RBP17.91■□□□□ 0.46
DDX41-201ENST00000330503 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
DDX41-201ENST00000330503 CD99L2Q8TCZ2 262 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 KBTBD7Q8WVZ9 684 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 DPH5Q9H2P9 285 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 AGO3Q9H9G7 860 aaKnown RBP17.91■□□□□ 0.46
DDX41-201ENST00000330503 WDR35Q9P2L0 1181 aa17.91■□□□□ 0.46
DDX41-201ENST00000330503 KPNA7A9QM74 516 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 TRPA1O75762 1119 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 KCNJ1P48048 391 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 NFX1Q12986 1120 aaKnown RBP17.9■□□□□ 0.46
DDX41-201ENST00000330503 HLTFQ14527 1009 aaKnown RBP eCLIP17.9■□□□□ 0.46
DDX41-201ENST00000330503 MAP3K21Q5TCX8 1036 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 LRRC38Q5VT99 294 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 TXNRD3NBQ6F5E7 133 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 UNC93AQ86WB7 457 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 ARFGAP1Q8N6T3 406 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 C1orf54Q8WWF1 131 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 PPP1R10Q96QC0 940 aaKnown RBP17.9■□□□□ 0.46
DDX41-201ENST00000330503 HEMGNQ9BXL5 484 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 CFHR5Q9BXR6 569 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 ACBD3Q9H3P7 528 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 FAM114A2Q9NRY5 505 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 POLR3GO15318 223 aaPredicted RBP17.9■□□□□ 0.46
DDX41-201ENST00000330503 XPOTO43592 962 aaKnown RBP17.9■□□□□ 0.46
DDX41-201ENST00000330503 RALAP11233 206 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 GJC1P36383 396 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 GPS2Q13227 327 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 KLF1Q13351 362 aaPredicted RBP17.9■□□□□ 0.46
DDX41-201ENST00000330503 GOLGA7BQ2TAP0 167 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 ZNF618Q5T7W0 954 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 MREGQ8N565 214 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 GSTCDQ8NEC7 633 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 OR6B3Q8NGW1 331 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 ZFP42Q96MM3 310 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 TRIM31Q9BZY9 425 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 DPEP3Q9H4B8 488 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 SYNCQ9H7C4 482 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 CHST12Q9NRB3 414 aa17.9■□□□□ 0.46
DDX41-201ENST00000330503 CENPFP49454 3210 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms