RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
EPHB3-201ENST00000330394 RNF146Q9NTX7 359 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 APOL1O14791 398 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 MGRN1O60291 552 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 PSMG1O95456 288 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 ASNSP08243 561 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 FECHP22830 423 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 RWDD4Q6NW29 188 aaKnown RBP14.66□□□□□ -0.06
EPHB3-201ENST00000330394 SNX25Q9H3E2 840 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 PPCSQ9HAB8 311 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 GRID1Q9ULK0 1009 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 GPC3P51654 580 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 ROR2Q01974 943 aaKnown RBP14.66□□□□□ -0.06
EPHB3-201ENST00000330394 MTMR2Q13614 643 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 LACTB2Q53H82 288 aaPredicted RBP14.66□□□□□ -0.06
EPHB3-201ENST00000330394 CCDC134Q9H6E4 229 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 V9GYQ6 96 aa14.66□□□□□ -0.06
EPHB3-201ENST00000330394 CSDE1O75534 798 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 ATP6V1C1P21283 382 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 MAP4P27816 1152 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 R3HDM1Q15032 1099 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 TRMT5Q32P41 509 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 EFHC1Q5JVL4 640 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 PALB2Q86YC2 1186 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 TMPRSS6Q8IU80 811 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 GCNAQ96QF7 691 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 AGAP1Q9UPQ3 857 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 AGLP35573 1532 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 MGEA5O60502 916 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 FAM200BP0CF97 657 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 CIITAP33076 1130 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 ELK3P41970 407 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 NBPF20Q3BBV1 942 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 ACBD5Q5T8D3 534 aaPredicted RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 ECHDC2Q86YB7 292 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 EFCAB3Q8N7B9 438 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 OXNAD1Q96HP4 312 aaPredicted RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 CHCHD3Q9NX63 227 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 AFF2P51816 1311 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 FAM237BA0A1B0GVD1 139 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 NKRFO15226 690 aaKnown RBP eCLIP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 NLRP11P59045 1033 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 KCTD21Q4G0X4 260 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 TFDP3Q5H9I0 405 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 RAB44Q7Z6P3 723 aaPredicted RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 UBA3Q8TBC4 463 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 CYGBQ8WWM9 190 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 AGBL1Q96MI9 1066 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 C12orf65Q9H3J6 166 aaKnown RBP14.65□□□□□ -0.06
EPHB3-201ENST00000330394 OLFML3Q9NRN5 406 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 TAGLN3Q9UI15 199 aa14.65□□□□□ -0.06
EPHB3-201ENST00000330394 TBC1D12O60347 775 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 E2F6O75461 281 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 TMED10P49755 219 aaKnown RBP14.65□□□□□ -0.07
EPHB3-201ENST00000330394 OASLQ15646 514 aaKnown RBP14.65□□□□□ -0.07
EPHB3-201ENST00000330394 ANO4Q32M45 955 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 Q3C1V9 767 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 ZBTB41Q5SVQ8 909 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 SIX6OS1Q8N1H7 587 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 ETNPPLQ8TBG4 499 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 VPS39Q96JC1 886 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 ANKRD27Q96NW4 1050 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 SLC4A9Q96Q91 983 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 ADNPQ9H2P0 1102 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 PIH1D1Q9NWS0 290 aaKnown RBP14.65□□□□□ -0.07
EPHB3-201ENST00000330394 NYAP2Q9P242 653 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 SLC24A2Q9UI40 661 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 TBX20Q9UMR3 447 aa14.65□□□□□ -0.07
EPHB3-201ENST00000330394 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 GSTA4O15217 222 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SFNP31947 248 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 NME3Q13232 169 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 COBLL1Q53SF7 1204 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 NUP93Q8N1F7 819 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 EPS8L1Q8TE68 723 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 INPP5DQ92835 1189 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 STX18Q9P2W9 335 aaKnown RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SYCE1LA8MT33 242 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 DNALI1O14645 258 aaPredicted RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SRGAP2BP0DMP2 458 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SLC12A3P55017 1021 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 YWHAHQ04917 246 aaPredicted RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 FAAP100Q0VG06 881 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 TNFAIP1Q13829 316 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SNRNP48Q6IEG0 339 aaKnown RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 LLGL2Q6P1M3 1020 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 INTS5Q6P9B9 1019 aaKnown RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 MCOLN2Q8IZK6 566 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 LINC00116Q8NCU8 138 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 PPP2R3CQ969Q6 453 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 KLHL4Q9C0H6 718 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 TASP1Q9H6P5 420 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 TBC1D23Q9NUY8 699 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 NMRK1Q9NWW6 199 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 PCYOX1Q9UHG3 505 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 A0A1W2PPM1 405 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 AHCYL1O43865 530 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms