RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 TAF5Q15542 800 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 PDK4Q16654 411 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 HIF1AQ16665 826 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 TAF1BQ53T94 588 aaPredicted RBP18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 TRIM68Q6AZZ1 485 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 WDTC1Q8N5D0 677 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 JOSD2Q8TAC2 188 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 PCSK1NQ9UHG2 260 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 STARD13Q9Y3M8 1113 aa18.28■□□□□ 0.52
PTP4A3-201ENST00000329397 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 A0A1B0GUA9 196 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 C2orf71A6NGG8 1288 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 PLSCR1O15162 318 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 RAP1GAPP47736 663 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 ACVR2BQ13705 512 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 TFDP3Q5H9I0 405 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 TRIM72Q6ZMU5 477 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 BZW1Q7L1Q6 419 aaKnown RBP18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 RPAINQ86UA6 219 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 TTC8Q8TAM2 541 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 CCHCR1Q8TD31 782 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 C10orf82Q8WW14 230 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 CGRRF1Q99675 332 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 USH1CQ9Y6N9 552 aa18.27■□□□□ 0.52
PTP4A3-201ENST00000329397 TYROBPO43914 113 aa18.27■□□□□ 0.51
PTP4A3-201ENST00000329397 RFC1P35251 1148 aaPredicted RBP18.27■□□□□ 0.51
PTP4A3-201ENST00000329397 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.51
PTP4A3-201ENST00000329397 CENPUQ71F23 418 aa18.27■□□□□ 0.51
PTP4A3-201ENST00000329397 CST8O60676 142 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 ENTPD5O75356 428 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 BBS9Q3SYG4 887 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 FKBP1CQ5VVH2 108 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 MTDHQ86UE4 582 aaKnown RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 FAM13CQ8NE31 585 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 RFWD2Q8NHY2 731 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 ZNF75CPQ92670 426 aaPredicted RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 PTPRN2Q92932 1015 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 SLC7A6OSQ96CW6 309 aaPredicted RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 PRR11Q96HE9 360 aaPredicted RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 TBC1D10AQ9BXI6 508 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 CISHQ9NSE2 258 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 TXLNGQ9NUQ3 528 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 A0A0B4J269 797 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 PRPF4O43172 522 aaKnown RBP eCLIP18.26■□□□□ 0.517e-7■■■■□ 21.5
PTP4A3-201ENST00000329397 TMEM63AO94886 807 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 TMEM132BQ14DG7 1078 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 MORF4L2Q15014 288 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 C3orf62Q6ZUJ4 267 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 SAMD7Q7Z3H4 446 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 LONP2Q86WA8 852 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 RIBC1Q8N443 379 aaPredicted RBP18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 PYROXD1Q8WU10 500 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 LRRN4Q8WUT4 740 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 GRAMD1AQ96CP6 724 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 VCPIP1Q96JH7 1222 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 SLC24A3Q9HC58 644 aa18.26■□□□□ 0.51
PTP4A3-201ENST00000329397 PIK3R2O00459 728 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 ALOX15BO15296 676 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 SUPT20HL2P0C7V6 817 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 LMNB2Q03252 620 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 SUPT20HL1Q3ZLR7 823 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 ARFGAP1Q8N6T3 406 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 RDM1Q8NG50 284 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 TCP10LQ8TDR4 215 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CPT1BQ92523 772 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 PAFAH2Q99487 392 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 IMPG2Q9BZV3 1241 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 PORCNQ9H237 461 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 PSMC3IPQ9P2W1 217 aaPredicted RBP18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 NXF1Q9UBU9 619 aaKnown RBP18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 RABGEF1Q9UJ41 708 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 A0A0G2JND7 137 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CD19P15391 556 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 PSMA2P25787 234 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 TFAMQ00059 246 aaKnown RBP18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CNTN2Q02246 1040 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 MAP3K10Q02779 954 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 NLRP9Q7RTR0 991 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 FBXO36Q8NEA4 188 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 TTC25Q96NG3 672 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 ZNF302Q9NR11 478 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CYTH4Q9UIA0 394 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 ZNF214Q9UL59 606 aaPredicted RBP18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CHMP2BQ9UQN3 213 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 TCRBV5S1A1TA0A578 114 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 TBXAS1P24557 533 aaPredicted RBP18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 TGFB2P61812 414 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CAPSQ13938 189 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 DENND1BQ6P3S1 775 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms