RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FAM153BP0C7A2 387 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 MGAT3Q09327 533 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 PDCLQ13371 301 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 PIGHQ14442 188 aaPredicted RBP15.79■□□□□ 0.12
TPM3-205ENST00000328159 HLTFQ14527 1009 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM3-205ENST00000328159 ZNF268Q14587 947 aaPredicted RBP15.79■□□□□ 0.12
TPM3-205ENST00000328159 STILQ15468 1287 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 FAM153CQ494X1 144 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 FBXO47Q5MNV8 452 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 CCSAPQ6IQ19 270 aaPredicted RBP15.79■□□□□ 0.12
TPM3-205ENST00000328159 RPAINQ86UA6 219 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 DDX42Q86XP3 938 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM3-205ENST00000328159 XYLT1Q86Y38 959 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 UBA3Q8TBC4 463 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 MAIP1Q8WWC4 291 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 ZNF560Q96MR9 790 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 TRIM51Q9BSJ1 452 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 RAB17Q9H0T7 212 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 FAM114A2Q9NRY5 505 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 SRRDQ9UH36 339 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 PCYOX1Q9UHG3 505 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 FAM153AQ9UHL3 310 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 DAPK3O43293 454 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 KRT3P12035 628 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 HOXD10P28358 340 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 ECHS1P30084 290 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 PNPLA4P41247 253 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 PTGIRP43119 386 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 GABRB2P47870 512 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 SOX4Q06945 474 aaPredicted RBP15.78■□□□□ 0.12
TPM3-205ENST00000328159 NFX1Q12986 1120 aaKnown RBP15.78■□□□□ 0.12
TPM3-205ENST00000328159 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 GOLGA7BQ2TAP0 167 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 TTC27Q6P3X3 843 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 UNC93AQ86WB7 457 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 JAMLQ86YT9 394 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 NIPA2Q8N8Q9 360 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 C12orf50Q8NA57 414 aaPredicted RBP15.78■□□□□ 0.12
TPM3-205ENST00000328159 EXD1Q8NHP7 514 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 RUNDC3BQ96NL0 473 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 CFHR5Q9BXR6 569 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 CHST12Q9NRB3 414 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 TSPAN16Q9UKR8 245 aa15.78■□□□□ 0.12
TPM3-205ENST00000328159 KPNA7A9QM74 516 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 F8VP50 259 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 RFC1P35251 1148 aaPredicted RBP15.77■□□□□ 0.12
TPM3-205ENST00000328159 GJC1P36383 396 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 COILP38432 576 aaPredicted RBP15.77■□□□□ 0.12
TPM3-205ENST00000328159 AARSP49588 968 aaKnown RBP eCLIP15.77■□□□□ 0.12
TPM3-205ENST00000328159 TAF6P49848 677 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 PTGISQ16647 500 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 LRRC38Q5VT99 294 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 CCDC137Q6PK04 289 aaKnown RBP15.77■□□□□ 0.12
TPM3-205ENST00000328159 ACOT1Q86TX2 421 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 CCDC50Q8IVM0 306 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 C12orf29Q8N999 325 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 PCSK9Q8NBP7 692 aaKnown RBP15.77■□□□□ 0.12
TPM3-205ENST00000328159 OR6B3Q8NGW1 331 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 CD99L2Q8TCZ2 262 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 IPO4Q8TEX9 1081 aaKnown RBP15.77■□□□□ 0.12
TPM3-205ENST00000328159 MCRS1Q96EZ8 462 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 ERP44Q9BS26 406 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 DPH5Q9H2P9 285 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 GOLGA2P5Q9HBQ8 144 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 RASAL2Q9UJF2 1139 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 NME7Q9Y5B8 376 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 GRIN2DO15399 1336 aa15.77■□□□□ 0.12
TPM3-205ENST00000328159 SPTLC1O15269 473 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 TCF4P15884 667 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 FNTAP49354 379 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 LLGL1Q15334 1064 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 SV2CQ496J9 727 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 MAP3K21Q5TCX8 1036 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 DUPD1Q68J44 220 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 TSEN2Q8NCE0 465 aaKnown RBP15.77■□□□□ 0.11
TPM3-205ENST00000328159 JOSD2Q8TAC2 188 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 HERPUD2Q9BSE4 406 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 LRRC19Q9H756 370 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 METTL5Q9NRN9 209 aaKnown RBP15.77■□□□□ 0.11
TPM3-205ENST00000328159 FAM105AQ9NUU6 356 aa15.77■□□□□ 0.11
TPM3-205ENST00000328159 PTGESO14684 152 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 TRPA1O75762 1119 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 PFKMP08237 780 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 RALAP11233 206 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 PSMA2P25787 234 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 THPOP40225 353 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 KCTD19Q17RG1 926 aaPredicted RBP15.76■□□□□ 0.11
TPM3-205ENST00000328159 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 PPP1R26Q5T8A7 1209 aaPredicted RBP15.76■□□□□ 0.11
TPM3-205ENST00000328159 HACE1Q8IYU2 909 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 RCOR2Q8IZ40 523 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 MREGQ8N565 214 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 FNIP1Q8TF40 1166 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 PPP1R10Q96QC0 940 aaKnown RBP15.76■□□□□ 0.11
TPM3-205ENST00000328159 TRIM31Q9BZY9 425 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 NEUROG2Q9H2A3 272 aa15.76■□□□□ 0.11
TPM3-205ENST00000328159 MED4Q9NPJ6 270 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms