RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GCP02774 474 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 GNA15P30679 374 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 GRM1Q13255 1194 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ARHGEF16Q5VV41 709 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 AKAP14Q86UN6 197 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 FBXO11Q86XK2 927 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ARID3BQ8IVW6 561 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 DEFB107AQ8IZN7 70 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 SIX5Q8N196 739 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 BEST2Q8NFU1 509 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 BORCS5Q969J3 196 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 STK39Q9UEW8 545 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ZMYM2Q9UBW7 1377 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ZBTB8OSQ8IWT0 167 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PDCD6IPQ8WUM4 868 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 VPS11Q9H270 941 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 KCNK4Q9NYG8 393 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 RIMBP3CA6NJZ7 1639 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 RIMBP3BA6NNM3 1639 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 RIMBP3Q9UFD9 1639 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 EIF3DO15371 548 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 CYP11B2P19099 503 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 CNTFP26441 200 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 CACNB1Q02641 598 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 CAPRIN1Q14444 709 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 EZH2Q15910 746 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 SPANXN2Q5MJ10 180 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 TCHHL1Q5QJ38 904 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 HEATR6Q6AI08 1181 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PDXDC2PQ6P474 469 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 FBXO28Q9NVF7 368 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF180Q9UJW8 692 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 SORCS3Q9UPU3 1222 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ASXL3Q9C0F0 2248 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 FAM196BA6NMK8 535 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MEIS1O00470 390 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 AREL1O15033 823 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MYCLP12524 364 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CD58P19256 250 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 IL12RB1P42701 662 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PTK2BQ14289 1009 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CCNYQ8ND76 341 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PHC3Q8NDX5 983 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MCUQ8NE86 351 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SEPT1Q8WYJ6 367 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SLC10A4Q96EP9 437 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 FAM111AQ96PZ2 611 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ARHGEF38Q9NXL2 777 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 GRID1Q9ULK0 1009 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ITM2BQ9Y287 266 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 HEY1Q9Y5J3 304 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TOGARAM1Q9Y4F4 1720 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 AP3B1O00203 1094 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ZBED4O75132 1171 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 GUCY1A2P33402 732 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ZC3H12AQ5D1E8 599 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ASAP3Q8TDY4 903 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 HDAC7Q8WUI4 952 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 THAP1Q9NVV9 213 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ALPK2Q86TB3 2170 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TRIM43BA6NCK2 446 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 LDHAP00338 332 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TMEM253P0C7T8 217 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SURF1Q15526 300 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TMEM270Q6UE05 265 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 STX19Q8N4C7 294 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ST13P5Q8NFI4 369 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 AGR3Q8TD06 166 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 FAR2Q96K12 515 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 RABL2BQ9UNT1 228 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 FLT1P17948 1338 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 EMSYQ7Z589 1322 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MAP3K13O43283 966 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SNX3O60493 162 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 KLHL41O60662 606 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SERPINB5P36952 375 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 AQP5P55064 265 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 RPS6P62753 249 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 GRM4Q14833 912 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 DQX1Q8TE96 717 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CEP95Q96GE4 821 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CEP44Q9C0F1 390 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CYLDQ9NQC7 956 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CLIC5Q9NZA1 410 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CROTQ9UKG9 612 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TMEM191CA6NGB0 347 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 LRRIQ4A6NIV6 560 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TLR3O15455 904 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PAEPP09466 180 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF12P17014 697 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SLFN12LQ6IEE8 588 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 DPP8Q6V1X1 898 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 OLFM1Q99784 485 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CNPY3Q9BT09 278 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TLR10Q9BXR5 811 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 INTS2Q9H0H0 1204 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms