RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SLC10A5Q5PT55 438 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.91□□□□□ -0.02
PABPC1-201ENST00000318607 ACTL9Q8TC94 416 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 TMEM143Q96AN5 459 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
PABPC1-201ENST00000318607 CCDC134Q9H6E4 229 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 NDE1Q9NXR1 346 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 IL1RAPL1Q9NZN1 696 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 UVRAGQ9P2Y5 699 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 TELO2Q9Y4R8 837 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 E5RJQ4 531 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 H7C0C1 242 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 DNAJC6O75061 913 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 GGPS1O95749 300 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 GLRA2P23416 452 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 ATP5OP48047 213 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 LIG4P49917 911 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 YARSP54577 528 aaKnown RBP14.91□□□□□ -0.02
PABPC1-201ENST00000318607 COG7P83436 770 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 DMP1Q13316 513 aaPredicted RBP14.91□□□□□ -0.02
PABPC1-201ENST00000318607 C1orf220Q5T0J3 134 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 SH3TC2Q8TF17 1288 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 ZNF333Q96JL9 665 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 NENFQ9UMX5 172 aa14.91□□□□□ -0.02
PABPC1-201ENST00000318607 KIF3CO14782 793 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 TRIP10Q15642 601 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 CHI3L2Q15782 390 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 CLUL1Q15846 466 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 KBTBD12Q3ZCT8 623 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 IYDQ6PHW0 289 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 NPNTQ6UXI9 565 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 CD101Q93033 1021 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 POLR3CQ9BUI4 534 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 RAVER2Q9HCJ3 691 aaKnown RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 PI4KBQ9UBF8 816 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 TJP2Q9UDY2 1190 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 XPO7Q9UIA9 1087 aaKnown RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 STARD13Q9Y3M8 1113 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 TRIM49D1C9J1S8 452 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 COPEO14579 308 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 EIF3DO15371 548 aaKnown RBP eCLIP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 PEX1O43933 1283 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 CD48P09326 243 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 ITGB5P18084 799 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 SMARCA1P28370 1054 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 ADSSP30520 456 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 ABCG1P45844 678 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 CLEC16AQ2KHT3 1053 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 APOBEC3HQ6NTF7 200 aaKnown RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 DNAJC24Q6P3W2 148 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 RIBC1Q8N443 379 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 MAIP1Q8WWC4 291 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 EZH1Q92800 747 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 DDX27Q96GQ7 796 aaKnown RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 FIZ1Q96SL8 496 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 SYT11Q9BT88 431 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 PPM1HQ9ULR3 514 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 CCDC88AQ3V6T2 1871 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 UGT1A9O60656 530 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 OTUD4Q01804 1114 aaKnown RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 ZBTB41Q5SVQ8 909 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 FOXB2Q5VYV0 432 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 RIPOR1Q6ZS17 1223 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 GALNT4Q8N4A0 578 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 RBM15BQ8NDT2 890 aaKnown RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 UGT1A7Q9HAW7 530 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 UGT1A10Q9HAW8 530 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 UGT1A8Q9HAW9 530 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 SEPT9Q9UHD8 586 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-201ENST00000318607 LRCH1Q9Y2L9 728 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 LRRC42Q9Y546 428 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 FRMPD4Q14CM0 1322 aa14.9□□□□□ -0.02
PABPC1-201ENST00000318607 LYPLA1O75608 230 aaPredicted RBP14.89□□□□□ -0.03
PABPC1-201ENST00000318607 PSMD10O75832 226 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 ATP5HO75947 161 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 TJP3O95049 919 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 SOX11P35716 441 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 ROR2Q01974 943 aaKnown RBP14.89□□□□□ -0.03
PABPC1-201ENST00000318607 ASPHQ12797 758 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 TAF5Q15542 800 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 TTLL6Q8N841 843 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 TMEM206Q9H813 350 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 IFT122Q9HBG6 1241 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 APPL1Q9UKG1 709 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 ELK3P41970 407 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 GEMIN4P57678 1058 aaKnown RBP14.89□□□□□ -0.03
PABPC1-201ENST00000318607 RALGPS1Q5JS13 557 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 PAOXQ6QHF9 649 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 CEP128Q6ZU80 1094 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 DENND5BQ6ZUT9 1274 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 PDIK1LQ8N165 341 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 GLT8D2Q9H1C3 349 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 SLC17A6Q9P2U8 582 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
PABPC1-201ENST00000318607 KIAA1551Q9HCM1 1747 aa14.89□□□□□ -0.03
PABPC1-201ENST00000318607 HNRNPRO43390 633 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms