RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ATP9AO75110 1047 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 LSM8O95777 96 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TXKP42681 527 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ZAP70P43403 619 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 CASP5P51878 434 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 CYP4F22Q6NT55 531 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TAF2Q6P1X5 1199 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 LPCAT2Q7L5N7 544 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 CYP2U1Q7Z449 544 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ERO1BQ86YB8 467 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 LCORLQ8N3X6 602 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ALLCQ8N6M5 410 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TTLL11Q8NHH1 800 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TOP1MTQ969P6 601 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 UNKQ9C0B0 810 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 EPB41L1Q9H4G0 881 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PLEKHA5Q9HAU0 1116 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TBK1Q9UHD2 729 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 GPC6Q9Y625 555 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ESYT3A0FGR9 886 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 RGL2O15211 777 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 SH3BP5O60239 455 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 GJB6O95452 261 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 KRT1P04264 644 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PDGFRBP09619 1106 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ITGA6P23229 1130 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 SERPINB5P36952 375 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 FXR1P51114 621 aaKnown RBP eCLIP4.7□□□□□ -1.662e-6■■■□□ 18.8
CNOT1-201ENST00000317147 ZNF135P52742 658 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 CTDSPL2Q05D32 466 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.661e-6■■□□□ 12.9
CNOT1-201ENST00000317147 SAMD4BQ5PRF9 694 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 FAM47EQ6ZV65 393 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 NLRP10Q86W26 655 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TTC30AQ86WT1 665 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PACRGLQ8N7B6 248 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ENDOVQ8N8Q3 282 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 EXD1Q8NHP7 514 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 SPATA20Q8TB22 786 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 DEPDC1BQ8WUY9 529 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PSPC1Q8WXF1 523 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 AMNQ9BXJ7 453 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 C17orf75Q9HAS0 396 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 GALNT8Q9NY28 637 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 BARHL2Q9NY43 387 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 APEX2Q9UBZ4 518 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PHTF1Q9UMS5 762 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 POLIQ9UNA4 740 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PCDHB6Q9Y5E3 794 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 DUSP10Q9Y6W6 482 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TMEM2Q9UHN6 1383 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TRIM24O15164 1050 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PRKCIP41743 596 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 SLC29A2Q14542 456 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ZNF394Q53GI3 561 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 SPANXN2Q5MJ10 180 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 XXYLT1Q8NBI6 393 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 MCPH1Q8NEM0 835 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ADCY4Q8NFM4 1077 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 OSBP2Q969R2 916 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ZNF496Q96IT1 587 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 BCL7BQ9BQE9 202 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 NUP85Q9BW27 656 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 GPBP1L1Q9HC44 474 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 RHBDL2Q9NX52 303 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ANKRD6Q9Y2G4 727 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 A0A0G2JLW4 131 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 CNOT3O75175 753 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ZNF200P98182 395 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 KRT17Q04695 432 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PTPAQ15257 358 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PPP6R3Q5H9R7 873 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 C6orf52Q5T4I8 152 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 IZUMO3Q5VZ72 239 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 LRRC8EQ6NSJ5 796 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 STRA8Q7Z7C7 330 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 NUP93Q8N1F7 819 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 CASKIN2Q8WXE0 1202 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 NLRP3Q96P20 1036 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 RBBP8Q99708 897 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 RPAP3Q9H6T3 665 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TUFT1Q9NNX1 390 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 SLC39A2Q9NP94 309 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TICRRQ7Z2Z1 1910 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 METP08581 1390 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 NCOA6Q14686 2063 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 LRRIQ4A6NIV6 560 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PPP1R3GB7ZBB8 358 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 IRS4O14654 1257 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 PEX1O43933 1283 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 VDRP11473 427 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TMOD1P28289 359 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 MESDQ14696 234 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 RASA2Q15283 850 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TRAF7Q6Q0C0 670 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 USP49Q70CQ1 688 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 TRMT1LQ7Z2T5 733 aaKnown RBP4.7□□□□□ -1.66
CNOT1-201ENST00000317147 AFG1LQ8WV93 481 aa4.7□□□□□ -1.66
CNOT1-201ENST00000317147 ARHGEF26Q96DR7 871 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms