RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SENP6Q9GZR1 1112 aaPredicted RBP15.02■□□□□ -0
VRK3-201ENST00000316763 STMN4Q9H169 189 aaPredicted RBP15.02■□□□□ -0
VRK3-201ENST00000316763 STARD7Q9NQZ5 370 aa15.02■□□□□ -0
VRK3-201ENST00000316763 HOMER3Q9NSC5 361 aa15.02■□□□□ -0
VRK3-201ENST00000316763 SLC12A6Q9UHW9 1150 aa15.02■□□□□ -0
VRK3-201ENST00000316763 CPSF3Q9UKF6 684 aaKnown RBP15.02■□□□□ -0
VRK3-201ENST00000316763 MROH7Q68CQ1 1323 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 TSPAN1O60635 241 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 FAM107AO95990 144 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 RARGP13631 454 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 ARF4P18085 180 aaPredicted RBP15.02□□□□□ -0.01
VRK3-201ENST00000316763 RRM1P23921 792 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 GNA15P30679 374 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 ADCY2Q08462 1091 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 PTP4A2Q12974 167 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 KCTD19Q17RG1 926 aaPredicted RBP15.02□□□□□ -0.01
VRK3-201ENST00000316763 ZNF568Q3ZCX4 644 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 FAM47CQ5HY64 1035 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 C6orf118Q5T5N4 469 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 MON1BQ7L1V2 547 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 BRSK2Q8IWQ3 736 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 MYCBPAPQ8TBZ2 947 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 CYFIP2Q96F07 1278 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 GCOM2Q9BZD3 368 aaPredicted RBP15.02□□□□□ -0.01
VRK3-201ENST00000316763 CDT1Q9H211 546 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 PDZD7Q9H5P4 517 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 WHRNQ9P202 907 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 SCINQ9Y6U3 715 aa15.02□□□□□ -0.01
VRK3-201ENST00000316763 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 GMNCA6NCL1 334 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 PROSCO94903 275 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 CALCAP01258 141 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 CLTAP09496 248 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 DARSP14868 501 aaKnown RBP15.01□□□□□ -0.01
VRK3-201ENST00000316763 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
VRK3-201ENST00000316763 ACO1P21399 889 aaKnown RBP15.01□□□□□ -0.01
VRK3-201ENST00000316763 TNFSF9P41273 254 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 TMEM62Q0P6H9 643 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 SPOPLQ6IQ16 392 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 TMEM270Q6UE05 265 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.01□□□□□ -0.01
VRK3-201ENST00000316763 PGM2Q96G03 612 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 TMEM109Q9BVC6 243 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 CDHR5Q9HBB8 845 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 PPANQ9NQ55 473 aaKnown RBP15.01□□□□□ -0.01
VRK3-201ENST00000316763 ADAM22Q9P0K1 906 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 GGA2Q9UJY4 613 aa15.01□□□□□ -0.01
VRK3-201ENST00000316763 PSTPIP1O43586 416 aa15□□□□□ -0.01
VRK3-201ENST00000316763 GAS8O95995 478 aa15□□□□□ -0.01
VRK3-201ENST00000316763 PAEPP09466 180 aa15□□□□□ -0.01
VRK3-201ENST00000316763 MCF2P10911 925 aa15□□□□□ -0.01
VRK3-201ENST00000316763 HARSP12081 509 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 COL6A1P12109 1028 aa15□□□□□ -0.01
VRK3-201ENST00000316763 EIF4BP23588 611 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 KCNJ1P48048 391 aa15□□□□□ -0.01
VRK3-201ENST00000316763 NOP14P78316 857 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 SEZ6Q53EL9 994 aa15□□□□□ -0.01
VRK3-201ENST00000316763 GDF6Q6KF10 455 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 SLC43A3Q8NBI5 491 aa15□□□□□ -0.01
VRK3-201ENST00000316763 RBBP8NLQ8NC74 664 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 RNF25Q96BH1 459 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 PAWRQ96IZ0 340 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 EPB41L4BQ9H329 900 aa15□□□□□ -0.01
VRK3-201ENST00000316763 CNTN6Q9UQ52 1028 aa15□□□□□ -0.01
VRK3-201ENST00000316763 PTPRJQ12913 1337 aa15□□□□□ -0.01
VRK3-201ENST00000316763 RGS16O15492 202 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 THAP12O43422 761 aa15□□□□□ -0.01
VRK3-201ENST00000316763 CAND2O75155 1236 aa15□□□□□ -0.01
VRK3-201ENST00000316763 ITIH2P19823 946 aa15□□□□□ -0.01
VRK3-201ENST00000316763 HOXA11P31270 313 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 CETN2P41208 172 aa15□□□□□ -0.01
VRK3-201ENST00000316763 NOMO3P69849 1222 aa15□□□□□ -0.01
VRK3-201ENST00000316763 CAV1Q03135 178 aa15□□□□□ -0.01
VRK3-201ENST00000316763 KRT17Q04695 432 aa15□□□□□ -0.01
VRK3-201ENST00000316763 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 NCOA4Q13772 614 aa15□□□□□ -0.01
VRK3-201ENST00000316763 SLC29A2Q14542 456 aa15□□□□□ -0.01
VRK3-201ENST00000316763 TMEM132AQ24JP5 1023 aa15□□□□□ -0.01
VRK3-201ENST00000316763 TRMT10CQ7L0Y3 403 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 CDR2LQ86X02 465 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 PHF13Q86YI8 300 aaPredicted RBP15□□□□□ -0.01
VRK3-201ENST00000316763 RHOT1Q8IXI2 618 aa15□□□□□ -0.01
VRK3-201ENST00000316763 C1orf54Q8WWF1 131 aa15□□□□□ -0.01
VRK3-201ENST00000316763 ABHD8Q96I13 439 aa15□□□□□ -0.01
VRK3-201ENST00000316763 CPB2Q96IY4 423 aa15□□□□□ -0.01
VRK3-201ENST00000316763 FAM84AQ96KN4 292 aa15□□□□□ -0.01
VRK3-201ENST00000316763 OSMRQ99650 979 aa15□□□□□ -0.01
VRK3-201ENST00000316763 APOBEC3GQ9HC16 384 aaKnown RBP15□□□□□ -0.01
VRK3-201ENST00000316763 ASIC3Q9UHC3 531 aa15□□□□□ -0.01
VRK3-201ENST00000316763 TLDC2A0PJX2 215 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 ARVCFO00192 962 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 TRAPPC3O43617 180 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 AGTP01019 485 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 SHBGP04278 402 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 CDK7P50613 346 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 CRYBB1P53674 252 aaPredicted RBP14.99□□□□□ -0.01
VRK3-201ENST00000316763 SEC24CP53992 1094 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 SNX17Q15036 470 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 SURF1Q15526 300 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 RPAINQ86UA6 219 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms