RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 REXO2Q9Y3B8 237 aaKnown RBP17.13■□□□□ 0.33
TUBB3-201ENST00000315491 O00370 1275 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 OAZ2O95190 189 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 EFEMP2O95967 443 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CCDC175P0C221 793 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PTPN1P18031 435 aaKnown RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PSMC1P62191 440 aaKnown RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 STILQ15468 1287 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CNGA2Q16280 664 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CCDC122Q5T0U0 273 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 KIAA0319Q5VV43 1072 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 ARHGAP17Q68EM7 881 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 ALKBH5Q6P6C2 394 aaKnown RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 TRIM72Q6ZMU5 477 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CEP57Q86XR8 500 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 B3GALNT2Q8NCR0 500 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 TMEM169Q96HH4 297 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 GDF15Q99988 308 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 UBE2OQ9C0C9 1292 aaKnown RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 TSC2P49815 1807 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 LCHNA4D1U4 455 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 ATP2C2O75185 946 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CYP1A1P04798 512 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 LINC00271P0C7V0 271 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PPM1AP35813 382 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 SLC20A2Q08357 652 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CLEC16AQ2KHT3 1053 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PASD1Q8IV76 773 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 RNF168Q8IYW5 571 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 CLP1Q92989 425 aaKnown RBP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 LPIN3Q9BQK8 851 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PPP2R2CQ9Y2T4 447 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PCDHB12Q9Y5F1 795 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 PCDHA13Q9Y5I0 950 aa17.12■□□□□ 0.33
TUBB3-201ENST00000315491 H0YGN5 161 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 MICAL2O94851 1124 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 MAGEA1P43355 309 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 RABGGTBP53611 331 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 MRPL58Q14197 206 aaKnown RBP17.11■□□□□ 0.33
TUBB3-201ENST00000315491 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
TUBB3-201ENST00000315491 C10orf76Q5T2E6 689 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 PPP1R26Q5T8A7 1209 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-201ENST00000315491 LCLAT1Q6UWP7 414 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 TAS1R1Q7RTX1 841 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 OR10T2Q8NGX3 314 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 B3GALT6Q96L58 329 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 VN1R3Q9BXE9 311 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 LUC7LQ9NQ29 371 aaKnown RBP17.11■□□□□ 0.33
TUBB3-201ENST00000315491 CRTAC1Q9NQ79 661 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 TAS2R14Q9NYV8 317 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 TSPAN16Q9UKR8 245 aa17.11■□□□□ 0.33
TUBB3-201ENST00000315491 TMCO5BA8MYB1 307 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 ZSCAN12O43309 604 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 GZMAP12544 262 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 UNGP13051 313 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-201ENST00000315491 CCDC130P13994 396 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 TERF2Q15554 542 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 USP41Q3LFD5 358 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 ZNF280DQ6N043 979 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 DENND1BQ6P3S1 775 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 CEP83Q9Y592 693 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 GRXCR1A8MXD5 290 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 M0QYV0 167 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 RTN2O75298 545 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 LSM8O95777 96 aaKnown RBP17.1■□□□□ 0.33
TUBB3-201ENST00000315491 SOD2P04179 222 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 VAV2P52735 878 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 NOMO3P69849 1222 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 TSPY1Q01534 308 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 CCDC142Q17RM4 750 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 NAA35Q5VZE5 725 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-201ENST00000315491 ACAD10Q6JQN1 1059 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 KIAA1328Q86T90 577 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
TUBB3-201ENST00000315491 KRT222Q8N1A0 295 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 TMEM35BQ8NCS4 154 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 TMEM209Q96SK2 561 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 LHX5Q9H2C1 402 aa17.1■□□□□ 0.33
TUBB3-201ENST00000315491 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 H7C4K7 107 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 TNNT1P13805 278 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 ADORA2BP29275 332 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-201ENST00000315491 CENPCQ03188 943 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 FAM171BQ6P995 826 aa17.09■□□□□ 0.33
TUBB3-201ENST00000315491 ANKS3Q6ZW76 656 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms