RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NOL9Q5SY16 702 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 TMC5Q6UXY8 1006 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 CLEC17AQ6ZS10 378 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 GPR141Q7Z602 305 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PRPF39Q86UA1 669 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 NMD3Q96D46 503 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SYBUQ9NX95 663 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 TRIM10Q9UDY6 481 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 TMEM120BA0PK00 339 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 DRAP1Q14919 205 aaPredicted RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 TTC33Q6PID6 262 aaPredicted RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 OTULINQ96BN8 352 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PPP1R16BQ96T49 567 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 RBM12Q9NTZ6 932 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 SRRDQ9UH36 339 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 LCMT1Q9UIC8 334 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 A0A1W2PQC6 194 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 H0YC42 278 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PAX7P23759 505 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 CPA2P48052 419 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 VEGFBP49765 207 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SIRT2Q8IXJ6 389 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 DDI1Q8WTU0 396 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 CHP1Q99653 195 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 BHMT2Q9H2M3 363 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SMARCAL1Q9NZC9 954 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 FAM198AQ9UFP1 575 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 IP6K2Q9UHH9 426 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PIN4Q9Y237 131 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 UBE4BO95155 1302 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 KLHL2O95198 593 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PLEKHA8P1O95397 391 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 CALB1P05937 261 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SCTRP47872 440 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 GCLMP48507 274 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 ARHGAP22Q7Z5H3 698 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SGMS1Q86VZ5 419 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 RFWD2Q8NHY2 731 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 MDM1Q8TC05 714 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SH3TC2Q8TF17 1288 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 EPAS1Q99814 870 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 MSTO1Q9BUK6 570 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 BBS2Q9BXC9 721 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 UBE2OQ9C0C9 1292 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 SEL1LQ9UBV2 794 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PCSK1NQ9UHG2 260 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 E7ENQ6 273 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 SRP72O76094 671 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 TMCC1O94876 653 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 KCNA2P16389 499 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 GRK2P25098 689 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 KRT72Q14CN4 511 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 RHOT1Q8IXI2 618 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 RFFLQ8WZ73 363 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 RIT2Q99578 217 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 MRPL4Q9BYD3 311 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 EXOSC4Q9NPD3 245 aaKnown RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 NDUFA13Q9P0J0 144 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 DTNAQ9Y4J8 743 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 TBX3O15119 743 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 FOXN1O15353 648 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 SLC10A3P09131 477 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 TRIM25Q14258 630 aaKnown RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 TTC39CQ8N584 583 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 INTS2Q9H0H0 1204 aaKnown RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 FBXO28Q9NVF7 368 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 AKAP12Q02952 1782 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 MYO1GB0I1T2 1018 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 PHF2O75151 1096 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 TSC22D2O75157 780 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 CDH16O75309 829 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 TADA2AO75478 443 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 DGAT1O75907 488 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 GJB1P08034 283 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 ITGA4P13612 1032 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 CDH2P19022 906 aaPredicted RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 HSPA13P48723 471 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 GRIN1Q05586 938 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 COASYQ13057 564 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 WLSQ5T9L3 541 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 MICU2Q8IYU8 434 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 TMEM35BQ8NCS4 154 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 TMEM245Q9H330 911 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 SLC28A3Q9HAS3 691 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 SARS2Q9NP81 518 aaKnown RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 CASS4Q9NQ75 786 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 UBAP1Q9NZ09 502 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 PHRF1Q9P1Y6 1649 aaKnown RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 RAD51CO43502 376 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 CIITAP33076 1130 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 SOX11P35716 441 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 TBL3Q12788 808 aaKnown RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 HEATR6Q6AI08 1181 aaKnown RBP8.54□□□□□ -1.04
VPS41-202ENST00000310301 GLYCTKQ8IVS8 523 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 ZNF786Q8N393 782 aa8.54□□□□□ -1.04
VPS41-202ENST00000310301 ATL2Q8NHH9 583 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms