RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 CHST7Q9NS84 486 aa10.48□□□□□ -0.73
CHRNA9-201ENST00000310169 CLDND1Q9NY35 253 aa10.48□□□□□ -0.73
CHRNA9-201ENST00000310169 DONSONQ9NYP3 566 aa10.48□□□□□ -0.73
CHRNA9-201ENST00000310169 AGAP1Q9UPQ3 857 aa10.48□□□□□ -0.73
CHRNA9-201ENST00000310169 IRAK3Q9Y616 596 aa10.48□□□□□ -0.73
CHRNA9-201ENST00000310169 EPN1Q9Y6I3 576 aaPredicted RBP10.48□□□□□ -0.73
CHRNA9-201ENST00000310169 TRIM49BA6NDI0 452 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 TMCO5BA8MYB1 307 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PHACTR2O75167 634 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 NDUFA10O95299 355 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 POLR2BP30876 1174 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CASP14P31944 242 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CYLC1P35663 651 aaPredicted RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 LILRA4P59901 499 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 GOLGA8FQ08AF8 430 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 GOLGA8DPQ0D2H9 430 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 HYAL1Q12794 435 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 MTF1Q14872 753 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 ZCWPW2Q504Y3 356 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 KIAA0319Q5VV43 1072 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PDXDC1Q6P996 788 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CCNI2Q6ZMN8 369 aaPredicted RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 GLYCTKQ8IVS8 523 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 RNF168Q8IYW5 571 aaPredicted RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 EIF1ADQ8N9N8 165 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 OR8K1Q8NGG5 319 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 AENQ8WTP8 325 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 HLA-CQ95604 372 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CAVIN3Q969G5 261 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CDCA3Q99618 268 aaPredicted RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 RNF14Q9UBS8 474 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CTNND2Q9UQB3 1225 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PIRO00625 290 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 EIF3HO15372 352 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 AKAP3O75969 853 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 FSBPO95073 299 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 ADH1AP07327 375 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CNPP09543 421 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 SRGAP2BP0DMP2 458 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 KCNA4P22459 653 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 TKTP29401 623 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PNPLA4P41247 253 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 NDUFV1P49821 464 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 TAF6P49848 677 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 COPB1P53618 953 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PMS1P54277 932 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 STX17P56962 302 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 RBP5P82980 135 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PAK1Q13153 545 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 BIRC3Q13489 604 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 RTP2Q5QGT7 225 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 LLGL2Q6P1M3 1020 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PRSS55Q6UWB4 352 aaPredicted RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CD300LGQ6UXG3 332 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 INTS8Q75QN2 995 aaKnown RBP10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 C1orf127Q8N9H9 656 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 APPL2Q8NEU8 664 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 PARD3BQ8TEW8 1205 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 ZNF560Q96MR9 790 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 CGRRF1Q99675 332 aa10.47□□□□□ -0.73
CHRNA9-201ENST00000310169 VWA8A3KMH1 1905 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 A0A1W2PQJ5 194 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 ARHGEF37A1IGU5 675 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 PPEF2O14830 753 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 SYN3O14994 580 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 N4BP1O75113 896 aaKnown RBP10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 EFEMP2O95967 443 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 RHOXF2BP0C7M4 288 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 FGFR3P22607 806 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 PAX3P23760 479 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 VAMP7P51809 220 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 GYS2P54840 703 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 CREMQ03060 361 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 MYO1EQ12965 1108 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 TRPC3Q13507 836 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 PSMD5Q16401 504 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 DUSP6Q16828 381 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 SV2CQ496J9 727 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 ANKS3Q6ZW76 656 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 PABPC5Q96DU9 382 aaKnown RBP10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 FAM84AQ96KN4 292 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 RHOXF2Q9BQY4 288 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 THAP9Q9H5L6 903 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 CAPN11Q9UMQ6 739 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 COG5Q9UP83 839 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 PTPRJQ12913 1337 aa10.46□□□□□ -0.73
CHRNA9-201ENST00000310169 GOLGA6CA6NDK9 693 aa10.46□□□□□ -0.74
CHRNA9-201ENST00000310169 KPNA7A9QM74 516 aa10.46□□□□□ -0.74
CHRNA9-201ENST00000310169 MAPK13O15264 365 aa10.46□□□□□ -0.74
CHRNA9-201ENST00000310169 TEX28O15482 410 aa10.46□□□□□ -0.74
CHRNA9-201ENST00000310169 TEX33O43247 280 aa10.46□□□□□ -0.74
CHRNA9-201ENST00000310169 GOLGA6DP0CG33 693 aa10.46□□□□□ -0.74
CHRNA9-201ENST00000310169 RPL17P18621 184 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms