RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FAM193BQ96PV7 902 aaPredicted RBP8.82□□□□□ -1
CHD6-201ENST00000309279 MED15Q96RN5 788 aa8.82□□□□□ -1
CHD6-201ENST00000309279 TSG101Q99816 390 aa8.82□□□□□ -1
CHD6-201ENST00000309279 C17orf80Q9BSJ5 609 aa8.82□□□□□ -1
CHD6-201ENST00000309279 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
CHD6-201ENST00000309279 TTYH1Q9H313 450 aaPredicted RBP8.82□□□□□ -1
CHD6-201ENST00000309279 ZNF576Q9H609 170 aa8.82□□□□□ -1
CHD6-201ENST00000309279 AAASQ9NRG9 546 aa8.82□□□□□ -1
CHD6-201ENST00000309279 MRGBPQ9NV56 204 aa8.82□□□□□ -1
CHD6-201ENST00000309279 SLC38A7Q9NVC3 462 aa8.82□□□□□ -1
CHD6-201ENST00000309279 DONSONQ9NYP3 566 aa8.82□□□□□ -1
CHD6-201ENST00000309279 ZMAT5Q9UDW3 170 aaKnown RBP8.82□□□□□ -1
CHD6-201ENST00000309279 DNAJB4Q9UDY4 337 aa8.82□□□□□ -1
CHD6-201ENST00000309279 RWDD2AQ9UIY3 292 aa8.82□□□□□ -1
CHD6-201ENST00000309279 N6AMT1Q9Y5N5 214 aa8.82□□□□□ -1
CHD6-201ENST00000309279 REV3LO60673 3130 aa8.81□□□□□ -1
CHD6-201ENST00000309279 ALG1L2C9J202 215 aa8.81□□□□□ -1
CHD6-201ENST00000309279 CETN3O15182 167 aa8.81□□□□□ -1
CHD6-201ENST00000309279 ZC3H11AO75152 810 aaKnown RBP eCLIP8.81□□□□□ -1
CHD6-201ENST00000309279 RASGRP1O95267 797 aa8.81□□□□□ -1
CHD6-201ENST00000309279 PMLP29590 882 aa8.81□□□□□ -1
CHD6-201ENST00000309279 LRPAP1P30533 357 aa8.81□□□□□ -1
CHD6-201ENST00000309279 PSMC2P35998 433 aaKnown RBP8.81□□□□□ -1
CHD6-201ENST00000309279 SOX4Q06945 474 aaPredicted RBP8.81□□□□□ -1
CHD6-201ENST00000309279 CYP24A1Q07973 514 aa8.81□□□□□ -1
CHD6-201ENST00000309279 PSMD6Q15008 389 aa8.81□□□□□ -1
CHD6-201ENST00000309279 UPP1Q16831 310 aa8.81□□□□□ -1
CHD6-201ENST00000309279 SPATA1Q5VX52 437 aa8.81□□□□□ -1
CHD6-201ENST00000309279 JADE1Q6IE81 842 aa8.81□□□□□ -1
CHD6-201ENST00000309279 HIBCHQ6NVY1 386 aaPredicted RBP8.81□□□□□ -1
CHD6-201ENST00000309279 IRGCQ6NXR0 463 aa8.81□□□□□ -1
CHD6-201ENST00000309279 SASS6Q6UVJ0 657 aa8.81□□□□□ -1
CHD6-201ENST00000309279 C1orf122Q6ZSJ8 110 aa8.81□□□□□ -1
CHD6-201ENST00000309279 COLGALT1Q8NBJ5 622 aa8.81□□□□□ -1
CHD6-201ENST00000309279 KIF12Q96FN5 646 aa8.81□□□□□ -1
CHD6-201ENST00000309279 PDE11AQ9HCR9 933 aa8.81□□□□□ -1
CHD6-201ENST00000309279 C6orf203Q9P0P8 240 aaPredicted RBP8.81□□□□□ -1
CHD6-201ENST00000309279 DACH1Q9UI36 760 aa8.81□□□□□ -1
CHD6-201ENST00000309279 UBQLN1Q9UMX0 589 aaKnown RBP8.81□□□□□ -1
CHD6-201ENST00000309279 PCDHB12Q9Y5F1 795 aa8.81□□□□□ -1
CHD6-201ENST00000309279 EYSQ5T1H1 3165 aa8.81□□□□□ -1
CHD6-201ENST00000309279 H3BNC9 293 aa8.8□□□□□ -1
CHD6-201ENST00000309279 NRP1O14786 923 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SLC16A3O15427 465 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 XPOTO43592 962 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 KIAA0754O94854 1291 aa8.8□□□□□ -1
CHD6-201ENST00000309279 EFEMP2O95967 443 aa8.8□□□□□ -1
CHD6-201ENST00000309279 NFICP08651 508 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TYRP1P17643 537 aa8.8□□□□□ -1
CHD6-201ENST00000309279 RPL9P32969 192 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 SCN1AP35498 2009 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PPM1AP35813 382 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SLC11A1P49279 550 aa8.8□□□□□ -1
CHD6-201ENST00000309279 RENBPP51606 427 aa8.8□□□□□ -1
CHD6-201ENST00000309279 KRT83P78385 493 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PLCB3Q01970 1234 aa8.8□□□□□ -1
CHD6-201ENST00000309279 APBA1Q02410 837 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SPAG1Q07617 926 aa8.8□□□□□ -1
CHD6-201ENST00000309279 MYBPC3Q14896 1274 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TMEM132DQ14C87 1099 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SEPT7Q16181 437 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 SPOUT1Q5T280 376 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 CEP135Q66GS9 1140 aa8.8□□□□□ -1
CHD6-201ENST00000309279 INTS8Q75QN2 995 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 EFCAB13Q8IY85 973 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SLC39A11Q8N1S5 342 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PLEKHO2Q8TD55 490 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PARD3BQ8TEW8 1205 aa8.8□□□□□ -1
CHD6-201ENST00000309279 C18orf25Q96B23 403 aaPredicted RBP8.8□□□□□ -1
CHD6-201ENST00000309279 IGSF21Q96ID5 467 aa8.8□□□□□ -1
CHD6-201ENST00000309279 ZNF558Q96NG5 402 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PAAF1Q9BRP4 392 aa8.8□□□□□ -1
CHD6-201ENST00000309279 FUCA2Q9BTY2 467 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PLXNA4Q9HCM2 1894 aa8.8□□□□□ -1
CHD6-201ENST00000309279 CYLDQ9NQC7 956 aa8.8□□□□□ -1
CHD6-201ENST00000309279 ANO10Q9NW15 660 aa8.8□□□□□ -1
CHD6-201ENST00000309279 CTNND2Q9UQB3 1225 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SPTBN5Q9NRC6 3674 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 MYO7AQ13402 2215 aa8.8□□□□□ -1
CHD6-201ENST00000309279 ANO9A1A5B4 782 aa8.8□□□□□ -1
CHD6-201ENST00000309279 CASTOR2A6NHX0 329 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TMEM189-UBE2V1I3L0A0 370 aa8.8□□□□□ -1
CHD6-201ENST00000309279 IKBKBO14920 756 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SGTAO43765 313 aa8.8□□□□□ -1
CHD6-201ENST00000309279 LPXNO60711 386 aa8.8□□□□□ -1
CHD6-201ENST00000309279 BTF3P20290 206 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 HPDP32754 393 aaPredicted RBP8.8□□□□□ -1
CHD6-201ENST00000309279 CTNNB1P35222 781 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PBX3P40426 434 aa8.8□□□□□ -1
CHD6-201ENST00000309279 OR1G1P47890 313 aa8.8□□□□□ -1
CHD6-201ENST00000309279 CLCNKBP51801 687 aa8.8□□□□□ -1
CHD6-201ENST00000309279 STX17P56962 302 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TYRO3Q06418 890 aa8.8□□□□□ -1
CHD6-201ENST00000309279 MLC1Q15049 377 aa8.8□□□□□ -1
CHD6-201ENST00000309279 STX1AQ16623 288 aa8.8□□□□□ -1
CHD6-201ENST00000309279 DUOXA2Q1HG44 320 aa8.8□□□□□ -1
CHD6-201ENST00000309279 ZNF697Q5TEC3 545 aa8.8□□□□□ -1
CHD6-201ENST00000309279 DCLRE1AQ6PJP8 1040 aa8.8□□□□□ -1
CHD6-201ENST00000309279 CD300LGQ6UXG3 332 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TMEM173Q86WV6 379 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms