RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IBSPP21815 317 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 DCUN1D2Q6PH85 259 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.76■■□□□ 1.394e-7■■■■■ 58.1
PDLIM2-202ENST00000308354 RUFY1Q96T51 708 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 NT5C1AQ9BXI3 368 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 RALGAPA2Q2PPJ7 1873 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 TMEM191CA6NGB0 347 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 SPTLC1O15269 473 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 VDRP11473 427 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 CYP3A5P20815 502 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 SLC1A1P43005 524 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 HTRA3P83110 453 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 DR1Q01658 176 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 OGDHQ02218 1023 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 ZNF252P-AS1Q0IIN9 211 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 SGO2Q562F6 1265 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 ACOT1Q86TX2 421 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 SEC14L1Q92503 715 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 LPIN3Q9BQK8 851 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 DPH5Q9H2P9 285 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 AGO3Q9H9G7 860 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 PSD3Q9NYI0 1048 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 UTP11Q9Y3A2 253 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 PIK3R2O00459 728 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 HMGCRP04035 888 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 TCF4P15884 667 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 CFAP58Q5T655 872 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 IQCKQ8N0W5 287 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 GOLGA6L1Q8N7Z2 621 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 PRELID2Q8N945 189 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 RAET1EQ8TD07 263 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 PIK3R5Q8WYR1 880 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 TRIM31Q9BZY9 425 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 TRMT13Q9NUP7 481 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 CACNG4Q9UBN1 327 aa23.75■■□□□ 1.39
PDLIM2-202ENST00000308354 CASP8AP2Q9UKL3 1982 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 AFF1P51825 1210 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 PPP2R5EQ16537 467 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 SOWAHAQ2M3V2 549 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 FBXO47Q5MNV8 452 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 LRRC52Q8N7C0 313 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 LPPQ93052 612 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 C18orf8Q96DM3 657 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 SYNCQ9H7C4 482 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 F8VP50 259 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 PIRO00625 290 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 ERBB2P04626 1255 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 KCNE1P15382 129 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 HSPA9P38646 679 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 CNGA2Q16280 664 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 XKR4Q5GH76 650 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 ZNF618Q5T7W0 954 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 SLC13A5Q86YT5 568 aaPredicted RBP23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 OR6B3Q8NGW1 331 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 DDX27Q96GQ7 796 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 FAM49BQ9NUQ9 324 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 DDX20Q9UHI6 824 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 TSPAN16Q9UKR8 245 aa23.74■■□□□ 1.39
PDLIM2-202ENST00000308354 PTGESO14684 152 aa23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 PHF2O75151 1096 aa23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 IGFBP6P24592 240 aaPredicted RBP23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 GPD2P43304 727 aa23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 PSMC1P62191 440 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 PPP1R15BQ5SWA1 713 aa23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 C3orf20Q8ND61 904 aa23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 IP6K2Q9UHH9 426 aa23.73■■□□□ 1.39
PDLIM2-202ENST00000308354 GOLGA6CA6NDK9 693 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 OPA1O60313 960 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 CD4P01730 458 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 KRT14P02533 472 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 GOLGA6DP0CG33 693 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 HSPA6P17066 643 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 MGAT3Q09327 533 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 ATP13A4Q4VNC1 1196 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 MAP3K21Q5TCX8 1036 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 DPEP3Q9H4B8 488 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 FAM105AQ9NUU6 356 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 KLHL11Q9NVR0 708 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 GOLGA6AQ9NYA3 693 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 KPNA7A9QM74 516 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 GHRP10912 638 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 HOXD10P28358 340 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 CD52P31358 61 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 RFC1P35251 1148 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 FLT3P36888 993 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 APLP1P51693 650 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 PDCLQ13371 301 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 ITGA7Q13683 1181 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 PPP1R26Q5T8A7 1209 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 REM2Q8IYK8 340 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 PCSK9Q8NBP7 692 aaKnown RBP23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 JOSD2Q8TAC2 188 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 ARL8AQ96BM9 186 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 HERPUD2Q9BSE4 406 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 RAB17Q9H0T7 212 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 PRDM4Q9UKN5 801 aa23.72■■□□□ 1.39
PDLIM2-202ENST00000308354 PDGFRBP09619 1106 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 RARAP10276 462 aa23.71■■□□□ 1.39
PDLIM2-202ENST00000308354 ATF7P17544 494 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms