RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 C11orf63Q6NUN7 778 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 SPATA18Q8TC71 538 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 TBC1D13Q9NVG8 400 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 HESX1Q9UBX0 185 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 CHORDC1Q9UHD1 332 aaPredicted RBP18.57■□□□□ 0.56
KRT28-201ENST00000306658 AMFRQ9UKV5 643 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 IGFBP6P24592 240 aaPredicted RBP18.57■□□□□ 0.56
KRT28-201ENST00000306658 GPD2P43304 727 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 RPS6KA1Q15418 735 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 TCTN1Q2MV58 587 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 C2CD6Q53TS8 623 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 PLEKHA7Q6IQ23 1121 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 CNKSR3Q6P9H4 555 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 METTL23Q86XA0 190 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 MNS1Q8NEH6 495 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 MIS12Q9H081 205 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 DPEP3Q9H4B8 488 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 SYNCQ9H7C4 482 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 FAM49BQ9NUQ9 324 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 DSEQ9UL01 958 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.56■□□□□ 0.56
KRT28-201ENST00000306658 NCK2O43639 380 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 DDHD2O94830 711 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 GOLGA7BQ2TAP0 167 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 NT5DC3Q86UY8 548 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 ZNF280BQ86YH2 543 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 NPAS4Q8IUM7 802 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 COLGALT2Q8IYK4 626 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 CEP112Q8N8E3 955 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 B3GALNT2Q8NCR0 500 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 UBA3Q8TBC4 463 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 OSBPL9Q96SU4 736 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 GOLPH3Q9H4A6 298 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 DDX43Q9NXZ2 648 aaKnown RBP18.56■□□□□ 0.56
KRT28-201ENST00000306658 WDR35Q9P2L0 1181 aa18.56■□□□□ 0.56
KRT28-201ENST00000306658 M0QZQ0 153 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 TIMP1P01033 207 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 CYP11A1P05108 521 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 SETSIPP0DME0 302 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 MAMLD1Q13495 774 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 MESDQ14696 234 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 OSTM1Q86WC4 334 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 CRIPAKQ8N1N5 446 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 C18orf8Q96DM3 657 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 CASD1Q96PB1 797 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 CARD6Q9BX69 1037 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 MRPL9Q9BYD2 267 aaKnown RBP18.55■□□□□ 0.56
KRT28-201ENST00000306658 CYTH4Q9UIA0 394 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 ANAPC7Q9UJX3 599 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 ALG6Q9Y672 507 aa18.55■□□□□ 0.56
KRT28-201ENST00000306658 TMEM189-UBE2V1I3L0A0 370 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 MYO1FO00160 1098 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 KIAA0355O15063 1070 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 HCRTO43612 131 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 SRGAP2O75044 1071 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 CAPN15O75808 1086 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 KIF4AO95239 1232 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PTPN1P18031 435 aaKnown RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 PCSK1P29120 753 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 OR1G1P47890 313 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 SNX16P57768 344 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 TAP1Q03518 808 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PDCLQ13371 301 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PTPN20Q4JDL3 420 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 PHLDB2Q86SQ0 1253 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 ANKRD52Q8NB46 1076 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 IPO4Q8TEX9 1081 aaKnown RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 SUSD3Q96L08 255 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PRDM10Q9NQV6 1147 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PRDM5Q9NQX1 630 aaPredicted RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 LCMT1Q9UIC8 334 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 PACSIN2Q9UNF0 486 aaPredicted RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 TIMM13Q9Y5L4 95 aaPredicted RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 TRAPPC3O43617 180 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 BRCC3P46736 316 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 GABRB2P47870 512 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 ZNF268Q14587 947 aaPredicted RBP18.54■□□□□ 0.56
KRT28-201ENST00000306658 PKDCCQ504Y2 493 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 DNAJC24Q6P3W2 148 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 CD300LGQ6UXG3 332 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 C3orf20Q8ND61 904 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 FEZF2Q8TBJ5 459 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 HASPINQ8TF76 798 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 STK32AQ8WU08 396 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 HES6Q96HZ4 224 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 CPXM1Q96SM3 734 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 MCOLN1Q9GZU1 580 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 CDH9Q9ULB4 789 aa18.54■□□□□ 0.56
KRT28-201ENST00000306658 TMEM110-MUSTN1A8MSY1 372 aa18.53■□□□□ 0.56
KRT28-201ENST00000306658 MIF4GDA9UHW6 222 aaKnown RBP18.53■□□□□ 0.56
KRT28-201ENST00000306658 RAG1P15918 1043 aa18.53■□□□□ 0.56
KRT28-201ENST00000306658 GTF2F1P35269 517 aaKnown RBP eCLIP18.53■□□□□ 0.56
KRT28-201ENST00000306658 BCAT1P54687 386 aa18.53■□□□□ 0.56
KRT28-201ENST00000306658 GSCP56915 257 aaPredicted RBP18.53■□□□□ 0.56
KRT28-201ENST00000306658 CKAP4Q07065 602 aaKnown RBP18.53■□□□□ 0.56
KRT28-201ENST00000306658 BST2Q10589 180 aaKnown RBP18.53■□□□□ 0.56
KRT28-201ENST00000306658 LLGL2Q6P1M3 1020 aa18.53■□□□□ 0.56
KRT28-201ENST00000306658 TTC30AQ86WT1 665 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms