RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ABHD10Q9NUJ1 306 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 FAM49BQ9NUQ9 324 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 LPXNO60711 386 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 CXCL14O95715 111 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 PAEPP09466 180 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 TSPY1Q01534 308 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 SMC1AQ14683 1233 aaKnown RBP28.88■■■□□ 2.21
HDAC3-201ENST00000305264 MDH1BQ5I0G3 518 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 GPR65Q8IYL9 337 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 HEXIM2Q96MH2 286 aaKnown RBP28.88■■■□□ 2.21
HDAC3-201ENST00000305264 ZSWIM1Q9BR11 485 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 TMLHEQ9NVH6 421 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 AIPL1Q9NZN9 384 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 GTF3C4Q9UKN8 822 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 GNA15P30679 374 aa28.87■■■□□ 2.21
HDAC3-201ENST00000305264 ARPP19P56211 112 aa28.87■■■□□ 2.21
HDAC3-201ENST00000305264 SLC8B1Q6J4K2 584 aa28.87■■■□□ 2.21
HDAC3-201ENST00000305264 TFAP2BQ92481 460 aa28.87■■■□□ 2.21
HDAC3-201ENST00000305264 NUCKS1Q9H1E3 243 aaKnown RBP28.87■■■□□ 2.21
HDAC3-201ENST00000305264 IRAK3Q9Y616 596 aa28.87■■■□□ 2.21
HDAC3-201ENST00000305264 C2orf71A6NGG8 1288 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 CD19P15391 556 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 BRD2P25440 801 aaKnown RBP28.86■■■□□ 2.21
HDAC3-201ENST00000305264 OR1D2P34982 312 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 ARID5BQ14865 1188 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 ASIC2Q16515 512 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 SLC39A12Q504Y0 691 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 IRF2BP2Q7Z5L9 587 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 MICAL1Q8TDZ2 1067 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 PDLIM2Q96JY6 352 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 RXFP1Q9HBX9 757 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 NGRNQ9NPE2 291 aaKnown RBP28.86■■■□□ 2.21
HDAC3-201ENST00000305264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.86■■■□□ 2.21
HDAC3-201ENST00000305264 SSX2IPQ9Y2D8 614 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 TEX28O15482 410 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 CNPP09543 421 aaKnown RBP28.86■■■□□ 2.21
HDAC3-201ENST00000305264 CPB1P15086 417 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 FERP16591 822 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 SMYD5Q6GMV2 418 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 FAM171BQ6P995 826 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 MRPL43Q8N983 215 aaKnown RBP28.86■■■□□ 2.21
HDAC3-201ENST00000305264 OR8K1Q8NGG5 319 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 EPS8L1Q8TE68 723 aa28.86■■■□□ 2.21
HDAC3-201ENST00000305264 OXCT2Q9BYC2 517 aaPredicted RBP28.86■■■□□ 2.21
HDAC3-201ENST00000305264 CCDC130P13994 396 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 CYP11B1P15538 503 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 ROR1Q01973 937 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 PTK2Q05397 1052 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 MYCBPAPQ8TBZ2 947 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 SYN2Q92777 582 aaPredicted RBP28.85■■■□□ 2.21
HDAC3-201ENST00000305264 FNIP2Q9P278 1114 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 PTPRDP23468 1912 aa28.85■■■□□ 2.21
HDAC3-201ENST00000305264 TMEM265A0A087WTH1 108 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 BMS1Q14692 1282 aaKnown RBP28.84■■■□□ 2.21
HDAC3-201ENST00000305264 NOP9Q86U38 636 aaKnown RBP28.84■■■□□ 2.21
HDAC3-201ENST00000305264 MYLPFQ96A32 169 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 PCED1BQ96HM7 432 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 LMAN2LQ9H0V9 348 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 WDR27A2RRH5 827 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 PDE6CP51160 858 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 CREMQ03060 361 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 SLC20A1Q8WUM9 679 aa28.84■■■□□ 2.21
HDAC3-201ENST00000305264 NOCTQ9UK39 431 aaKnown RBP28.84■■■□□ 2.21
HDAC3-201ENST00000305264 PLXNA3P51805 1871 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 THAP12O43422 761 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 VDRP11473 427 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 SKILP12757 684 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 HNRNPH3P31942 346 aaKnown RBP28.83■■■□□ 2.21
HDAC3-201ENST00000305264 SSTR3P32745 418 aaPredicted RBP28.83■■■□□ 2.21
HDAC3-201ENST00000305264 NDUFV1P49821 464 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 SGO2Q562F6 1265 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 PPP1R26Q5T8A7 1209 aaPredicted RBP28.83■■■□□ 2.21
HDAC3-201ENST00000305264 WDR59Q6PJI9 974 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 FMNL3Q8IVF7 1028 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 DCP1BQ8IZD4 617 aaKnown RBP28.83■■■□□ 2.21
HDAC3-201ENST00000305264 PGLYRP2Q96PD5 576 aa28.83■■■□□ 2.21
HDAC3-201ENST00000305264 GOLGA6L6A8MZA4 724 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 BPIFB4P59827 614 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 HGSNATQ68CP4 663 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 RNF19BQ6ZMZ0 732 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 SLC2A14Q8TDB8 520 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 CYFIP2Q96F07 1278 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 KLHL5Q96PQ7 755 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 B3GNT5Q9BYG0 378 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 DNAI2Q9GZS0 605 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 PRDM12Q9H4Q4 367 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 O00370 1275 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 CLDN5O00501 218 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 CYP27A1Q02318 531 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 GPR17Q13304 367 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 TAF3Q5VWG9 929 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 CCDC186Q7Z3E2 898 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 FUKQ8N0W3 1084 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 ZNF606Q8WXB4 792 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 DDX1Q92499 740 aaKnown RBP28.82■■■□□ 2.2
HDAC3-201ENST00000305264 RHOBTB2Q9BYZ6 727 aa28.82■■■□□ 2.2
HDAC3-201ENST00000305264 VNN2O95498 520 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 CFHP08603 1231 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 PRKCIP41743 596 aa28.81■■■□□ 2.2
HDAC3-201ENST00000305264 GRIN2CQ14957 1233 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms