RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 INTS6LQ5JSJ4 861 aaKnown RBP17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 MAML2Q8IZL2 1156 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 FUBP3Q96I24 572 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 MKNK1Q9BUB5 465 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 UXTQ9UBK9 157 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 SIX4Q9UIU6 781 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 PCDHGA2Q9Y5H1 932 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 R4GN57 208 aa17.9■□□□□ 0.46
TRAPPC1-201ENST00000303731 WDR87Q6ZQQ6 2873 aa17.89■□□□□ 0.46
TRAPPC1-201ENST00000303731 EHHADHQ08426 723 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 SNRNP35Q16560 246 aaKnown RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 CFAP221Q4G0U5 840 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 STXBP5Q5T5C0 1151 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 FOXD4L5Q5VV16 416 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 RESP18Q5W5W9 173 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 CBWD2Q8IUF1 395 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 CEP57L1Q8IYX8 460 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 ADGRF2Q8IZF7 708 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 ZNF687Q8N1G0 1237 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 CELF5Q8N6W0 485 aaKnown RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 FOXD4L4Q8WXT5 416 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 HPS3Q969F9 1004 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 CHRDQ9H2X0 955 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 IL21Q9HBE4 155 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 PRMT8Q9NR22 394 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 AGPAT3Q9NRZ7 376 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 THG1LQ9NWX6 298 aaKnown RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 NDRG2Q9UN36 371 aaKnown RBP17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 PCDHA7Q9UN72 937 aa17.89■□□□□ 0.45
TRAPPC1-201ENST00000303731 OTOGLQ3ZCN5 2332 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 SHISA7A6NL88 538 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 GABRDO14764 452 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 HOXD13P35453 343 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 KPNA1P52294 538 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 CSTF1Q05048 431 aaKnown RBP17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 FZD5Q13467 585 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 LRRC32Q14392 662 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 MAPRE1Q15691 268 aaKnown RBP17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 BMT2Q1RMZ1 405 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 C4orf50Q6ZRC1 276 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 RALGPS2Q86X27 583 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 GLIS3Q8NEA6 775 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 GOLGA5Q8TBA6 731 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 BPIFB1Q8TDL5 484 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 GIPC2Q8TF65 315 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 ATRIPQ8WXE1 791 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 TRMT2BQ96GJ1 504 aaKnown RBP17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 HPDLQ96IR7 371 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 CEP295NLQ96MC4 621 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 FNBP1Q96RU3 617 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 KIF9Q9HAQ2 790 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 ZSCAN32Q9NX65 697 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 NCANO14594 1321 aa17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 ZNF638Q14966 1978 aaKnown RBP17.88■□□□□ 0.45
TRAPPC1-201ENST00000303731 TGFB1I1O43294 461 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 FAM163BP0C2L3 166 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 AVPR1AP37288 418 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 NRLP54845 237 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 NLRP12P59046 1061 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 CYP4F8P98187 520 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 SOWAHAQ2M3V2 549 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 LIMS2Q7Z4I7 341 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 SPATA2LQ8IUW3 424 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 C12orf56Q8IXR9 622 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 CMTM8Q8IZV2 173 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 XXYLT1Q8NBI6 393 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 SCFD1Q8WVM8 642 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 MRPS31Q92665 395 aaKnown RBP17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 RSPRY1Q96DX4 576 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 PKMYT1Q99640 499 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 PI4K2AQ9BTU6 479 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 TMLHEQ9NVH6 421 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 RCOR1Q9UKL0 485 aa17.87■□□□□ 0.45
TRAPPC1-201ENST00000303731 OBSL1O75147 1896 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 MYBPHLA2RUH7 354 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 MYL1P05976 194 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 HMGA1P17096 107 aaKnown RBP17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 TNNI1P19237 187 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 CCNE1P24864 410 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 MAGEA11P43364 429 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 CCR3P51677 355 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 MTAPQ13126 283 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 PSMD6Q15008 389 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 DGKKQ5KSL6 1271 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 LMBRD2Q68DH5 695 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 ZBTB44Q8NCP5 570 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 OR5B17Q8NGF7 314 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 RUBCNQ92622 972 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 NELL1Q92832 810 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 MYRFLQ96LU7 910 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 CGRRF1Q99675 332 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 SLC46A2Q9BY10 475 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 LMAN1LQ9HAT1 526 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 GTF3C4Q9UKN8 822 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 CDH9Q9ULB4 789 aa17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 KIF26AQ9ULI4 1882 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC1-201ENST00000303731 SPECC1L-ADORA2AF8WAN1 911 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms