RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 FBXO40Q9UH90 709 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 ZNF197O14709 1029 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 AQP5P55064 265 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 CES3Q6UWW8 571 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 KATNA1O75449 491 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 HMGCS2P54868 508 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 DEFA1P59665 94 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 DEFA3P59666 94 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CDK17Q00537 523 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 COG2Q14746 738 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 MIEF2Q96C03 454 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 SRPK1Q96SB4 655 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 FAM25AB3EWG3 89 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 FAM25CB3EWG5 89 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 FAM25GB3EWG6 89 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 ECE2O60344 883 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 SGPL1O95470 568 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 GOLGA7BQ2TAP0 167 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 RCOR2Q8IZ40 523 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 B3GALNT2Q8NCR0 500 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CATSPER1Q8NEC5 780 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CMTM5Q96DZ9 223 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 FAM96AQ9H5X1 160 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 A8MX80 341 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 HSD17B4P51659 736 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CNGA2Q16280 664 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 RDM1Q8NG50 284 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 UBAP1Q9NZ09 502 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 A0A1B0GTH6 734 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 DPYDQ12882 1025 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 MGAT5BQ3V5L5 792 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 SLC30A10Q6XR72 485 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 DNAJC14Q6Y2X3 702 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 MMP19Q99542 508 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 TMEM79Q9BSE2 394 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 USP20Q9Y2K6 914 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 PZPP20742 1482 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 PSMC3P17980 439 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 WEE1P30291 646 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 MTMR2Q13614 643 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 CACUL1Q86Y37 369 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 TMC2Q8TDI7 906 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 UTP15Q8TED0 518 aaKnown RBP12.85□□□□□ -0.35
ABCA3-201ENST00000301732 TMEM121Q9BTD3 319 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 ARMC7Q9H6L4 198 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 DNAJC16Q9Y2G8 782 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
ABCA3-201ENST00000301732 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 TOMM70O94826 608 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 NCAM1P13591 858 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 BAG6P46379 1132 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 ERVK-24P63145 666 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 POU4F1Q01851 419 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 ZCCHC23Q6ZST2 131 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 PHF21BQ96EK2 531 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 IL25Q9H293 177 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 IARS2Q9NSE4 1012 aaKnown RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SNX30Q5VWJ9 437 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 FAM160B2Q86V87 743 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 USP38Q8NB14 1042 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 MTFMTQ96DP5 389 aaKnown RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 FAM107AO95990 144 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 IL5RAQ01344 420 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 CCNIQ14094 377 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 CYP51A1Q16850 503 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 CIAPIN1Q6FI81 312 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 CALML6Q8TD86 181 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 KIF2CQ99661 725 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SRGNP10124 158 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 NPEPPSP55786 919 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 TSC22D1Q15714 1073 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 TMEM120AQ9BXJ8 343 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 KLHL1Q9NR64 748 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms