RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 SRGAP1Q7Z6B7 1085 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 THNSL2Q86YJ6 484 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 ZBTB44Q8NCP5 570 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 NEDD1Q8NHV4 660 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 MYCBPAPQ8TBZ2 947 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 ZNF653Q96CK0 615 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PURBQ96QR8 312 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 P2RX7Q99572 595 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 DBNDD2Q9BQY9 259 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 EMILIN3Q9NT22 766 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SENP1Q9P0U3 644 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 RBPJLQ9UBG7 517 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 AMACRQ9UHK6 382 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 FAM153AQ9UHL3 310 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 DBNLQ9UJU6 430 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 TRHDEQ9UKU6 1024 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CTAGE9A4FU28 777 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 A8MX80 341 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 E7EVH7 732 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 WDR46O15213 610 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 TLR3O15455 904 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 THAP12O43422 761 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SMNDC1O75940 238 aaKnown RBP eCLIP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 FLOT1O75955 427 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 MYL4P12829 197 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 EEF2P13639 858 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 VAV1P15498 845 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 NAGAP17050 411 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 ACSL1P33121 698 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CSTF2P33240 577 aaKnown RBP eCLIP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PPARGP37231 505 aaPredicted RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 HNF4AP41235 474 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 AARSP49588 968 aaKnown RBP eCLIP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CARD18P57730 90 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 KRT85P78386 507 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 DYNC1I2Q13409 638 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PTK2BQ14289 1009 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SMAD1Q15797 465 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CNGA2Q16280 664 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SLC44A4Q53GD3 710 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 RNASEH2BQ5TBB1 312 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 ITPRIPL1Q6GPH6 555 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 KLC3Q6P597 504 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 ISLR2Q6UXK2 745 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 GPR142Q7Z601 462 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CCDC25Q86WR0 208 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 LRRC71Q8N4P6 559 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CSGALNACT2Q8N6G5 542 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SLC4A11Q8NBS3 891 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 FBXO30Q8TB52 745 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 BSNDQ8WZ55 320 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 MTMR8Q96EF0 704 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CHFRQ96EP1 664 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SLC2A13Q96QE2 648 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 SECISBP2Q96T21 854 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 AIFM2Q9BRQ8 373 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 YIPF4Q9BSR8 244 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PI4K2AQ9BTU6 479 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 LSM14BQ9BX40 385 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 CALN1Q9BXU9 219 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 GBA3Q9H227 469 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 NEK6Q9HC98 313 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 MRPL40Q9NQ50 206 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 KBTBD4Q9NVX7 518 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PLA2G2EQ9NZK7 142 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 HCSTQ9UBK5 93 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 DDX20Q9UHI6 824 aaKnown RBP4.89□□□□□ -1.63
ZNF560-201ENST00000301480 FBXL21Q9UKT6 434 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PCOLCE2Q9UKZ9 415 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 PHTF1Q9UMS5 762 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 ERVK-19Q9WJR5 959 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 HEY1Q9Y5J3 304 aa4.89□□□□□ -1.63
ZNF560-201ENST00000301480 DDX60LQ5H9U9 1706 aaKnown RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 MOXD2PA6NHM9 499 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 CCDC69A6NI79 296 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 H3BRJ5 948 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 H3BUI4 141 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 FSCN2O14926 492 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 SORBS3O60504 671 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 SLITRK3O94933 977 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 KLHL2O95198 593 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 ALDH2P05091 517 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 ABCB1P08183 1280 aaPredicted RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 EPB41P11171 864 aaKnown RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 STMN1P16949 149 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 CASTP20810 708 aaKnown RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 SFPQP23246 707 aaKnown RBP eCLIP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 MTIF2P46199 727 aaKnown RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 YARSP54577 528 aaKnown RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 MTTPP55157 894 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 RPP30P78346 268 aaKnown RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 NFKB2Q00653 900 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 LIPEQ05469 1076 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 PPFIA1Q13136 1202 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 AP3B2Q13367 1082 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 CCINQ13939 588 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 GRM3Q14832 879 aa4.88□□□□□ -1.63
ZNF560-201ENST00000301480 CRTC2Q53ET0 693 aaPredicted RBP4.88□□□□□ -1.63
ZNF560-201ENST00000301480 FAM205BPQ63HN1 556 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms