RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TMEM35BQ8NCS4 154 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 PLVAPQ9BX97 442 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 HES2Q9Y543 173 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 TMEM191CA6NGB0 347 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 POLR2BP30876 1174 aaKnown RBP23.16■■□□□ 1.3
TPM4-201ENST00000300933 GBP2P32456 591 aaPredicted RBP23.16■■□□□ 1.3
TPM4-201ENST00000300933 GRM1Q13255 1194 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 OSBPL8Q9BZF1 889 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 CDHR5Q9HBB8 845 aa23.16■■□□□ 1.3
TPM4-201ENST00000300933 C5orf60A6NFR6 353 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 TP73O15350 636 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 ASAP2O43150 1006 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 CAND2O75155 1236 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 NEBLO76041 1014 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 DRD4P21917 467 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 XRCC4Q13426 336 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 SMTNL2Q2TAL5 461 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 PTPN20Q4JDL3 420 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 C3orf20Q8ND61 904 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 MAML3Q96JK9 1138 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 DCLK3Q9C098 648 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 CPA4Q9UI42 421 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 SCINQ9Y6U3 715 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 PASKQ96RG2 1323 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 KAT6AQ92794 2004 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 IQCA1LA6NCM1 817 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 MTMR3Q13615 1198 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 NAA25Q14CX7 972 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 SURF1Q15526 300 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 GRIK4Q16099 956 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 VCPIP1Q96JH7 1222 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 VTA1Q9NP79 307 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 AGAP1Q9UPQ3 857 aa23.15■■□□□ 1.3
TPM4-201ENST00000300933 PLXNA1Q9UIW2 1896 aa23.14■■□□□ 1.3
TPM4-201ENST00000300933 ANK1P16157 1881 aa23.14■■□□□ 1.3
TPM4-201ENST00000300933 RFC1P35251 1148 aaPredicted RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 CHKAP35790 457 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 GTF2A2P52657 109 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 RAD23BP54727 409 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 ELF3P78545 371 aaPredicted RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 KCNT1Q5JUK3 1230 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 AGBL2Q5U5Z8 902 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 OR6J1Q8NGC5 347 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 JOSD2Q8TAC2 188 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 CLGNO14967 610 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 DYNC1LI2O43237 492 aaPredicted RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 DRG2P55039 364 aaKnown RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 LACTB2Q53H82 288 aaPredicted RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 MFSD7Q6UXD7 560 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 ILDR2Q71H61 639 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 UBA3Q8TBC4 463 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 CHMP6Q96FZ7 201 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 DDX23Q9BUQ8 820 aaKnown RBP23.14■■□□□ 1.29
TPM4-201ENST00000300933 ELOVL4Q9GZR5 314 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 SLC24A3Q9HC58 644 aa23.14■■□□□ 1.29
TPM4-201ENST00000300933 PNMA8AQ86V59 439 aaPredicted RBP23.13■■□□□ 1.29
TPM4-201ENST00000300933 GLIS1Q8NBF1 620 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 CPXM1Q96SM3 734 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 PABPC3Q9H361 631 aaKnown RBP23.13■■□□□ 1.29
TPM4-201ENST00000300933 NOD2Q9HC29 1040 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 SAE1Q9UBE0 346 aaPredicted RBP23.13■■□□□ 1.29
TPM4-201ENST00000300933 SKAP2O75563 359 aaPredicted RBP23.13■■□□□ 1.29
TPM4-201ENST00000300933 ATP6V1G2O95670 118 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 SLC8A1P32418 973 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 ACVR2BQ13705 512 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 LINC01465Q8N7H1 131 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 SELENOSQ9BQE4 189 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 C10orf88Q9H8K7 445 aa23.13■■□□□ 1.29
TPM4-201ENST00000300933 MGRN1O60291 552 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 TSPAN1O60635 241 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 ADCY8P40145 1251 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 CALCOCO2Q13137 446 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 KLF1Q13351 362 aaPredicted RBP23.12■■□□□ 1.29
TPM4-201ENST00000300933 C12orf50Q8NA57 414 aaPredicted RBP23.12■■□□□ 1.29
TPM4-201ENST00000300933 ART4Q93070 314 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 ZWILCHQ9H900 591 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 GBA2Q9HCG7 927 aaPredicted RBP23.12■■□□□ 1.29
TPM4-201ENST00000300933 IP6K2Q9UHH9 426 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 TCRBV5S1A1TA0A578 114 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 ACSL3O95573 720 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 KRT1P04264 644 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 MMP3P08254 477 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 PAEPP09466 180 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 ZSCAN5DPP0CG00 497 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 NFX1Q12986 1120 aaKnown RBP23.12■■□□□ 1.29
TPM4-201ENST00000300933 GLRA4Q5JXX5 417 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 DENND2CQ68D51 928 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 SLC4A11Q8NBS3 891 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 CXorf38Q8TB03 319 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 HPDLQ96IR7 371 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 XPO6Q96QU8 1125 aaKnown RBP23.12■■□□□ 1.29
TPM4-201ENST00000300933 TINF2Q9BSI4 451 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 KDM4CQ9H3R0 1056 aa23.12■■□□□ 1.29
TPM4-201ENST00000300933 TRIP11Q15643 1979 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 PLXNB2O15031 1838 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 MAGEB2O15479 319 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 CALB1P05937 261 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 C12orf29Q8N999 325 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 CCDC197Q8NCU1 140 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms