RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 I3L4J1 428 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 PGM3O95394 542 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 LMNB2Q03252 620 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 BRDTQ58F21 947 aaPredicted RBP15.39■□□□□ 0.05
COL6A2-201ENST00000300527 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 TREML1Q86YW5 311 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 SIAH1Q8IUQ4 282 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 PPM1NQ8N819 430 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 ATP11CQ8NB49 1132 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 DNAJC1Q96KC8 554 aaKnown RBP15.39■□□□□ 0.05
COL6A2-201ENST00000300527 MTO1Q9Y2Z2 717 aaKnown RBP15.39■□□□□ 0.05
COL6A2-201ENST00000300527 CLUHO75153 1309 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 P4HA2O15460 535 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 PDE5AO76074 875 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA31D3P0C874 917 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 SERPINB6P35237 376 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 OLFML2BQ68BL8 750 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 ZCCHC23Q6ZST2 131 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 SPATA31D4Q6ZUB0 917 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 CPXCR1Q8N123 301 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 GSTCDQ8NEC7 633 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 CENPKQ9BS16 269 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 TMEM8AQ9HCN3 771 aa15.39■□□□□ 0.05
COL6A2-201ENST00000300527 TCRBV7S3A2A0A539 114 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ADSSP30520 456 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 SLC5A9Q2M3M2 681 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 TBC1D25Q3MII6 688 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 CEP128Q6ZU80 1094 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 RAPH1Q70E73 1250 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 FAM81AQ8TBF8 368 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ZFAND2BQ8WV99 257 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 GATA6Q92908 595 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ECSITQ9BQ95 431 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ZNF212Q9UDV6 495 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 RABGEF1Q9UJ41 708 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 RNASEH1O60930 286 aaKnown RBP15.38■□□□□ 0.05
COL6A2-201ENST00000300527 OR6B1O95007 311 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-201ENST00000300527 GDF10P55107 478 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 AP2B1P63010 937 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 JAG1P78504 1218 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 MAMLD1Q13495 774 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 BMPR2Q13873 1038 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 UBAP2LQ14157 1087 aaKnown RBP15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ST13P4Q8IZP2 240 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-201ENST00000300527 OGFOD1Q8N543 542 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 DRAXINQ8NBI3 349 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-201ENST00000300527 SERAC1Q96JX3 654 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 CYLDQ9NQC7 956 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 FBXO28Q9NVF7 368 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ETNK2Q9NVF9 386 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 PACSIN3Q9UKS6 424 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 UMODL1Q5DID0 1318 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 GNA15P30679 374 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ACOT2P49753 483 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 GRAMD1BQ3KR37 738 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 FAM196AQ6ZSG2 479 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 ACER1Q8TDN7 264 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 TIPINQ9BVW5 301 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 TLE6Q9H808 572 aa15.38■□□□□ 0.05
COL6A2-201ENST00000300527 CYB561D2O14569 222 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 COPEO14579 308 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 ALOX15BO15296 676 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 HNRNPCL1O60812 293 aaKnown RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 RARRES1P49788 294 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 STAT2P52630 851 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 PSMC5P62195 406 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 SLC25A3Q00325 362 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 TCEAL1Q15170 157 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 ABTB1Q969K4 478 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 OPTNQ96CV9 577 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 PANX3Q96QZ0 392 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 TUBB6Q9BUF5 446 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 PCSK1NQ9UHG2 260 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 SLC24A2Q9UI40 661 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 ATRNL1Q5VV63 1379 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 PFDN1O60925 122 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 MAP3K6O95382 1288 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 UNGP13051 313 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 CRKP46108 304 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 HIRAP54198 1017 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 AQP5P55064 265 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 CDC16Q13042 620 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 SEZ6Q53EL9 994 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 CYP4A22Q5TCH4 519 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 APOBEC3HQ6NTF7 200 aaKnown RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 ULK2Q8IYT8 1036 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 ALLCQ8N6M5 410 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 EXD1Q8NHP7 514 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 LRRN4Q8WUT4 740 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 MRPL47Q9HD33 250 aaKnown RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 KMT5AQ9NQR1 393 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 XPO7Q9UIA9 1087 aaKnown RBP15.37■□□□□ 0.05
COL6A2-201ENST00000300527 MYPNQ86TC9 1320 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 PSTPIP1O43586 416 aa15.37■□□□□ 0.05
COL6A2-201ENST00000300527 AVILO75366 819 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms