RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 YTHDF3Q7Z739 585 aaKnown RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 PAFAH2Q99487 392 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 TRIM54Q9BYV2 358 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 GDF3Q9NR23 364 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 GLRA3O75311 464 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 AKAP3O75969 853 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 HLA-DPA1P20036 260 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
CLPX-201ENST00000300107 SERPINB1P30740 379 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 DMC1Q14565 340 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 CCNG2Q16589 344 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 PLA2G4FQ68DD2 849 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 KDELC2Q7Z4H8 507 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 SATB2Q9UPW6 733 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 HMOX2P30519 316 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 CLK1P49759 484 aaKnown RBP13.35□□□□□ -0.27
CLPX-201ENST00000300107 AQP5P55064 265 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 NUP107P57740 925 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 TTLL4Q14679 1199 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 VPS72Q15906 364 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 MICU2Q8IYU8 434 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 FRMD8P1Q9BZ68 369 aaPredicted RBP13.35□□□□□ -0.27
CLPX-201ENST00000300107 CASS4Q9NQ75 786 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 TAGLN3Q9UI15 199 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 EXTL3O43909 919 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 TPST1O60507 370 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 MED24O75448 989 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 MYO1DO94832 1006 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 ALBP02768 609 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 CYP11B1P15538 503 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 PSMC3P17980 439 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 GPD1P21695 349 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 PAX7P23759 505 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 SULT1E1P49888 294 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 SZRD1Q7Z422 152 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 ZNF786Q8N393 782 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 EIF1ADQ8N9N8 165 aaKnown RBP13.35□□□□□ -0.27
CLPX-201ENST00000300107 CERKQ8TCT0 537 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 ELMO2Q96JJ3 720 aa13.35□□□□□ -0.27
CLPX-201ENST00000300107 IGSF9BQ9UPX0 1349 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 TLR2O60603 784 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 RPS6P62753 249 aaKnown RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 IFI35P80217 286 aaPredicted RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 ZNF235Q14590 738 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 JADE3Q92613 823 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 RMDN1Q96DB5 314 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 MXRA8Q9BRK3 442 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 SLC39A10Q9ULF5 831 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 HNRNPRO43390 633 aaKnown RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 RPS6KA5O75582 802 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 APOA4P06727 396 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 DEFA1P59665 94 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 DEFA3P59666 94 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 MED15Q96RN5 788 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 ANKEF1Q9NU02 776 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 NDFIP2Q9NV92 336 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 TRPC5OSA6NMA1 111 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 RRM1P23921 792 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 PKN1Q16512 942 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 FAXCQ5TGI0 409 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 BTBD8Q5XKL5 378 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 NMD3Q96D46 503 aaKnown RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 ZNF212Q9UDV6 495 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 TM9SF1O15321 606 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 MSH4O15457 936 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 ZSCAN9O15535 394 aaPredicted RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 NR3C2P08235 984 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 MYL3P08590 195 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 MCL1Q07820 350 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 BAATQ14032 418 aaPredicted RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 GIT2Q14161 759 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 TFDP3Q5H9I0 405 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 EFHC1Q5JVL4 640 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 IYDQ6PHW0 289 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 TAS2R42Q7RTR8 314 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 SLC26A11Q86WA9 606 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 DUSP9Q99956 384 aaKnown RBP13.34□□□□□ -0.27
CLPX-201ENST00000300107 NT5C1AQ9BXI3 368 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
CLPX-201ENST00000300107 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLPX-201ENST00000300107 SPATA31A1Q5TZJ5 1347 aa13.33□□□□□ -0.27
CLPX-201ENST00000300107 KRT75O95678 551 aa13.33□□□□□ -0.27
CLPX-201ENST00000300107 PTGER2P43116 358 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms