RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 UBASH3BQ8TF42 649 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 DCUN1D1Q96GG9 259 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 TMEM120AQ9BXJ8 343 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 TBC1D22BQ9NU19 505 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 STK39Q9UEW8 545 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-201ENST00000299333 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
SCN3B-201ENST00000299333 MAGI3Q5TCQ9 1506 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CDC25CP30307 473 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 GUCY1A2P33402 732 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 RFC5P40937 340 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 NME5P56597 212 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 SNX30Q5VWJ9 437 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 SWSAP1Q6NVH7 229 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 HAUS6Q7Z4H7 955 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 GATAD2AQ86YP4 633 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 RSPH1Q8WYR4 309 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 PRCCQ92733 491 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 INTS13Q9NVM9 706 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 EURLQ9NYK6 297 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 GABBR1Q9UBS5 961 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 WDR19Q8NEZ3 1342 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CFAP99D6REC4 459 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CHRNB3Q05901 458 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 PCSK7Q16549 785 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 C11orf88Q6PI97 169 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CLVS1Q8IUQ0 354 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 PPIL6Q8IXY8 311 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 DEPDC7Q96QD5 511 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 DMAP1Q9NPF5 467 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 C15orf41Q9Y2V0 281 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 FAM25AB3EWG3 89 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 FAM25CB3EWG5 89 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 FAM25GB3EWG6 89 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 PSTPIP1O43586 416 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CAPZA2P47755 286 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 RGS7P49802 495 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 AQP5P55064 265 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 RASA2Q15283 850 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 TWF2Q6IBS0 349 aaKnown RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 FAM71DQ8N9W8 422 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 UXS1Q8NBZ7 420 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 HDHD2Q9H0R4 259 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 ATAD3AQ9NVI7 634 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 DDX20Q9UHI6 824 aaKnown RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CRKLP46109 303 aaKnown RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 RC3H1Q5TC82 1133 aaKnown RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 BTBD8Q5XKL5 378 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 WDR93Q6P2C0 686 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 TTC30AQ86WT1 665 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 L2HGDHQ9H9P8 463 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 PNMA8BQ9ULN7 279 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-201ENST00000299333 CLCA2Q9UQC9 943 aa15.44■□□□□ 0.06
SCN3B-201ENST00000299333 FKBP6O75344 327 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 USP11P51784 963 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 CENPCQ03188 943 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 ORC2Q13416 577 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-201ENST00000299333 DUOXA2Q1HG44 320 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 SMTNL2Q2TAL5 461 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 KLHL17Q6TDP4 642 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 WDR48Q8TAF3 677 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 MRPL4Q9BYD3 311 aaKnown RBP15.43■□□□□ 0.06
SCN3B-201ENST00000299333 FMO5P49326 533 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 CDK17Q00537 523 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 SYTL3Q4VX76 610 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 IL31Q6EBC2 164 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 ADCK2Q7Z695 626 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 RXFP1Q9HBX9 757 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 ZNF302Q9NR11 478 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 PGK2P07205 417 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 MAPK10P53779 464 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 COX10Q12887 443 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 PIGHQ14442 188 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-201ENST00000299333 CHMP1BQ7LBR1 199 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 STKLD1Q8NE28 680 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 PSMD3O43242 534 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 OTOAQ7RTW8 1153 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 GDPD5Q8WTR4 605 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 FAM167AQ96KS9 214 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 ZNF341Q9BYN7 854 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 VPS33BQ9H267 617 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 L1RE1Q9UN81 338 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 CST8O60676 142 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 TMEM253P0C7T8 217 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 NNMTP40261 264 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 SERPINH1P50454 418 aaKnown RBP15.43■□□□□ 0.06
SCN3B-201ENST00000299333 GRM4Q14833 912 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 NEDD8Q15843 81 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 NFIL3Q16649 462 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 FAM45BPQ6NSW5 357 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 ATP8B4Q8TF62 1192 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 PPP2R3CQ969Q6 453 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 VTA1Q9NP79 307 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 KRT84Q9NSB2 600 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
SCN3B-201ENST00000299333 TBC1D12O60347 775 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 GH2P01242 217 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 EIF2S1P05198 315 aaKnown RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 ALOX12P18054 663 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms