RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GSCP56915 257 aaPredicted RBP16.46■□□□□ 0.23
LSM6-201ENST00000296581 MBTPS1Q14703 1052 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 PTPN20Q4JDL3 420 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 CPNE8Q86YQ8 564 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 FEZF2Q8TBJ5 459 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 KRT35Q92764 455 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 RHOXF2Q9BQY4 288 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
LSM6-201ENST00000296581 RBM12Q9NTZ6 932 aaKnown RBP16.46■□□□□ 0.23
LSM6-201ENST00000296581 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 SPOPO43791 374 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 PROSCO94903 275 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 FAM163BP0C2L3 166 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 PLA2G4AP47712 749 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 AFF1P51825 1210 aaKnown RBP16.45■□□□□ 0.22
LSM6-201ENST00000296581 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 TOP6BLQ8N6T0 577 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 PGBD4Q96DM1 585 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 L1RE1Q9UN81 338 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 TARSL2A2RTX5 802 aaKnown RBP16.45■□□□□ 0.22
LSM6-201ENST00000296581 M0QYV0 167 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 TUBBP07437 444 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 TAP1Q03518 808 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 ZNF598Q86UK7 904 aaKnown RBP16.45■□□□□ 0.22
LSM6-201ENST00000296581 C3orf20Q8ND61 904 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 OR6B3Q8NGW1 331 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 PNKPQ96T60 521 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 RSAD1Q9HA92 442 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 UBN1Q9NPG3 1134 aa16.45■□□□□ 0.22
LSM6-201ENST00000296581 TMEM191CA6NGB0 347 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 FGFR1P11362 822 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 SCNN1GP51170 649 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 ZSCAN26Q16670 478 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 ARHGAP17Q68EM7 881 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 DNAJC24Q6P3W2 148 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 CRYBG2Q8N1P7 616 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 APPL2Q8NEU8 664 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 CPXM1Q96SM3 734 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 RGS18Q9NS28 235 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 ARGLU1Q9NWB6 273 aaPredicted RBP16.44■□□□□ 0.22
LSM6-201ENST00000296581 TSPAN16Q9UKR8 245 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 TDRD15B5MCY1 1934 aaKnown RBP16.44■□□□□ 0.22
LSM6-201ENST00000296581 A8MXQ7 604 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 HUS1O60921 280 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 WARSP23381 471 aaKnown RBP16.44■□□□□ 0.22
LSM6-201ENST00000296581 MAN1A1P33908 653 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 GABRB2P47870 512 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 RNASE9P60153 205 aaKnown RBP16.44■□□□□ 0.22
LSM6-201ENST00000296581 PDCLQ13371 301 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 PKDCCQ504Y2 493 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 SRLQ86TD4 932 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 ECHDC2Q86YB7 292 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 FAM126BQ8IXS8 530 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 C12orf29Q8N999 325 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 C18orf8Q96DM3 657 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 RNPC3Q96LT9 517 aaKnown RBP16.44■□□□□ 0.22
LSM6-201ENST00000296581 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
LSM6-201ENST00000296581 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
LSM6-201ENST00000296581 INPPL1O15357 1258 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 RPL9P32969 192 aaKnown RBP16.43■□□□□ 0.22
LSM6-201ENST00000296581 GNL1P36915 607 aaPredicted RBP16.43■□□□□ 0.22
LSM6-201ENST00000296581 CLCN6P51797 869 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 MTFR1Q15390 333 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 CLUL1Q15846 466 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 GOLGA7BQ2TAP0 167 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 PPP1R26Q5T8A7 1209 aaPredicted RBP16.43■□□□□ 0.22
LSM6-201ENST00000296581 WDR93Q6P2C0 686 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 GPATCH11Q8N954 259 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 DEFB118Q96PH6 123 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 IP6K2Q9UHH9 426 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 PODXLO00592 558 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 GJB6O95452 261 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 PFKMP08237 780 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 SELPP16109 830 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 RPL7AP62424 266 aaKnown RBP16.43■□□□□ 0.22
LSM6-201ENST00000296581 ZNF268Q14587 947 aaPredicted RBP16.43■□□□□ 0.22
LSM6-201ENST00000296581 BRD3Q15059 726 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 CYP4A22Q5TCH4 519 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 LRRC8DQ7L1W4 858 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 RTN4RL1Q86UN2 441 aaPredicted RBP16.43■□□□□ 0.22
LSM6-201ENST00000296581 ADGRF2Q8IZF7 708 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 SNX25Q9H3E2 840 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 TJP2Q9UDY2 1190 aa16.43■□□□□ 0.22
LSM6-201ENST00000296581 CCDC151A5D8V7 595 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 C9IYK1 514 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 ERBB2P04626 1255 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 SETSIPP0DME0 302 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 CCL5P13501 91 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 CLCNKBP51801 687 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 GLE1Q53GS7 698 aaKnown RBP16.42■□□□□ 0.22
LSM6-201ENST00000296581 CCDC70Q6NSX1 233 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms