RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 HEXIM2Q96MH2 286 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 LPIN3Q9BQK8 851 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 ZSWIM1Q9BR11 485 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 L2HGDHQ9H9P8 463 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 PUF60Q9UHX1 559 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 FGF18O76093 207 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 CD19P15391 556 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 EIF4A3P38919 411 aaKnown RBP18.91■□□□□ 0.62
CCDC78-201ENST00000293889 PDE6CP51160 858 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 RTP2Q5QGT7 225 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 VARS2Q5ST30 1063 aaKnown RBP18.91■□□□□ 0.62
CCDC78-201ENST00000293889 ZNF697Q5TEC3 545 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 KIAA0319Q5VV43 1072 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 DDX53Q86TM3 631 aaKnown RBP18.91■□□□□ 0.62
CCDC78-201ENST00000293889 CRYBG2Q8N1P7 616 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 THEM5Q8N1Q8 247 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 ARNTL2Q8WYA1 636 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
CCDC78-201ENST00000293889 FAM161BQ96MY7 647 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 SYT11Q9BT88 431 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 TTPALQ9BTX7 342 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 NHEJ1Q9H9Q4 299 aaPredicted RBP18.91■□□□□ 0.62
CCDC78-201ENST00000293889 VWA8A3KMH1 1905 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 ATG2AQ2TAZ0 1938 aa18.91■□□□□ 0.62
CCDC78-201ENST00000293889 SOWAHDA6NJG2 315 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 THAP12O43422 761 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 ATP2C2O75185 946 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 CHRNB2P17787 502 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 BRD2P25440 801 aaKnown RBP18.9■□□□□ 0.62
CCDC78-201ENST00000293889 CTNNB1P35222 781 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 PSMC1P62191 440 aaKnown RBP18.9■□□□□ 0.62
CCDC78-201ENST00000293889 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-201ENST00000293889 MRPL58Q14197 206 aaKnown RBP18.9■□□□□ 0.62
CCDC78-201ENST00000293889 USP41Q3LFD5 358 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 TAF3Q5VWG9 929 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 C12orf29Q8N999 325 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 KLHL23Q8NBE8 558 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 ZNF606Q8WXB4 792 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 AGPAT1Q99943 283 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 CHST7Q9NS84 486 aa18.9■□□□□ 0.62
CCDC78-201ENST00000293889 SOD2P04179 222 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 VDRP11473 427 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.62
CCDC78-201ENST00000293889 PCSK1P29120 753 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 CDR2Q01850 454 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 PLCB3Q01970 1234 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 KRT17Q04695 432 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 GRIN2CQ14957 1233 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 OR10T2Q8NGX3 314 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 OLIG1Q8TAK6 271 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 TNIP3Q96KP6 325 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 PPP1R13BQ96KQ4 1090 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 SYT15Q9BQS2 421 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 ACBD6Q9BR61 282 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 CDH9Q9ULB4 789 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 KIAA1257Q9ULG3 409 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 RWDD3Q9Y3V2 267 aa18.89■□□□□ 0.62
CCDC78-201ENST00000293889 SSU72P8A0A1W2PR75 194 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 MMEP08473 750 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 MTF1Q14872 753 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 CCDC142Q17RM4 750 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 ASTE1Q2TB18 679 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-201ENST00000293889 RAD9BQ6WBX8 426 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 B3GALNT2Q8NCR0 500 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 CCDC42Q96M95 316 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 HERC2P3Q9BVR0 1158 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 PLVAPQ9BX97 442 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 DNAI2Q9GZS0 605 aa18.89■□□□□ 0.61
CCDC78-201ENST00000293889 C5orf67F2Z3F1 127 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 RFXAPO00287 272 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 CFHP08603 1231 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 SSTR3P32745 418 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-201ENST00000293889 FMO1Q01740 532 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 CTXN3Q4LDR2 81 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 SGO2Q562F6 1265 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 PRSS55Q6UWB4 352 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-201ENST00000293889 ZNF677Q86XU0 584 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 VPS52Q8N1B4 723 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 FBXO22Q8NEZ5 403 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 RIN2Q8WYP3 895 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-201ENST00000293889 SAMD11Q96NU1 681 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 TMEM209Q96SK2 561 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC78-201ENST00000293889 CRTAC1Q9NQ79 661 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 FAM49BQ9NUQ9 324 aa18.88■□□□□ 0.61
CCDC78-201ENST00000293889 MYBPHLA2RUH7 354 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 O00370 1275 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 DDX3XO00571 662 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC78-201ENST00000293889 TNFAIP3P21580 790 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 DSG1Q02413 1049 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 MDH1BQ5I0G3 518 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 INTS6LQ5JSJ4 861 aaKnown RBP18.87■□□□□ 0.61
CCDC78-201ENST00000293889 ZNF280DQ6N043 979 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 KIAA1841Q6NSI8 718 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 ANKS3Q6ZW76 656 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 GLYCTKQ8IVS8 523 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 DEFB123Q8N688 67 aa18.87■□□□□ 0.61
CCDC78-201ENST00000293889 LNX1Q8TBB1 728 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-201ENST00000293889 PIK3R5Q8WYR1 880 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms