RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 HSPA4P34932 840 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CDC42EP1Q00587 391 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 EXOSC9Q06265 439 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 FLYWCH1Q4VC44 716 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 POTEHQ6S545 545 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 C16orf54Q6UWD8 224 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 LAYNQ6UX15 382 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DCP2Q8IU60 420 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 POMGNT2Q8NAT1 580 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 GPR156Q8NFN8 814 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 NEK11Q8NG66 645 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 NPLOC4Q8TAT6 608 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PTCHD1Q96NR3 888 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 TRAPPC9Q96Q05 1148 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DESI2Q9BSY9 194 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SEPT11Q9NVA2 429 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 ZNHIT6Q9NWK9 470 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 EIF2B4Q9UI10 523 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 SH3BGRL2Q9UJC5 107 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DERAQ9Y315 318 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SYNRGQ9UMZ2 1314 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SCG2P13521 617 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 HDCP19113 662 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PRKAR1BP31321 381 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PHKA1P46020 1223 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DCAF7P61962 342 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 YWHAHQ04917 246 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 TNIP1Q15025 636 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 HSP90B2PQ58FF3 399 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ATXN7L2Q5T6C5 722 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 RCSD1Q6JBY9 416 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SYT13Q7L8C5 426 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SPATA21Q7Z572 469 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ADCK1Q86TW2 530 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PEX5LQ8IYB4 626 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DZIP1LQ8IYY4 767 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 CDYL2Q8N8U2 506 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 UBASH3BQ8TF42 649 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 GCDHQ92947 438 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 C22orf23Q9BZE7 217 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ABCG4Q9H172 646 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SMURF1Q9HCE7 757 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 ZNF70Q9UC06 446 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 MAFFQ9ULX9 164 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CCDC69A6NI79 296 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 H0YC42 278 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 GRM6O15303 877 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 TSPAN3O60637 253 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 KERAO60938 352 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 AHSGP02765 367 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CCDC175P0C221 793 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 THPOP40225 353 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PCP4P48539 62 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 MAN2A2P49641 1150 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CDK5R2Q13319 367 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ARHGAP15Q53QZ3 475 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 RUNDC3AQ59EK9 446 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 HECTD3Q5T447 861 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 TMEM154Q6P9G4 183 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ZPBP2Q6X784 338 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 LRRC8DQ7L1W4 858 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DNAAF5Q86Y56 855 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 RHPN2Q8IUC4 686 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ADAMTS15Q8TE58 950 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 VPS33AQ96AX1 596 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 KRT23Q9C075 422 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 MLXIPQ9HAP2 919 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SPATA6Q9NWH7 488 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 MOCS1Q9NZB8 636 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 IL1RAPL1Q9NZN1 696 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 USP15Q9Y4E8 981 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 BRD4O60885 1362 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 CDC42BPGQ6DT37 1551 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ANKRD26Q9UPS8 1709 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 NKRFO15226 690 aaKnown RBP eCLIP2.97□□□□□ -1.93
CHD1-201ENST00000284049 ATP5BP06576 529 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 CCDC159P0C7I6 412 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PTGS1P23219 599 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 RGS3P49796 1198 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 MMP14P50281 582 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SESN2P58004 480 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 PRAMEP78395 509 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 ARF5P84085 180 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CAMK2DQ13557 499 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 KRT80Q6KB66 452 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CAVIN1Q6NZI2 390 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 TUSC5Q8IXB3 177 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 COPS5Q92905 334 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 FBXL18Q96ME1 805 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 TM7SF3Q9NS93 570 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PI4KBQ9UBF8 816 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 FAM135BQ49AJ0 1406 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SETD5Q9C0A6 1442 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CLTCL1P53675 1640 aa2.96□□□□□ -1.93
CHD1-201ENST00000284049 H7C0S8 307 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 BTN3A1O00481 513 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 FTH1P19P0C7X4 201 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 P4HA1P13674 534 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 DDCP20711 480 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms