RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 CLDND1Q9NY35 253 aa23.82■■□□□ 1.4
FAM53B-201ENST00000280780 PCDHB4Q9Y5E5 795 aa23.82■■□□□ 1.4
FAM53B-201ENST00000280780 SF3B1O75533 1304 aaKnown RBP eCLIP23.81■■□□□ 1.43e-6■■■■■ 129.9
FAM53B-201ENST00000280780 GABRDO14764 452 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 NRDCO43847 1150 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 CLASP2O75122 1294 aaKnown RBP23.81■■□□□ 1.4
FAM53B-201ENST00000280780 GFPT2O94808 682 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 CNPP09543 421 aaKnown RBP23.81■■□□□ 1.4
FAM53B-201ENST00000280780 WARSP23381 471 aaKnown RBP23.81■■□□□ 1.4
FAM53B-201ENST00000280780 FAM171A1Q5VUB5 890 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 TMEM270Q6UE05 265 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 EP400NLQ6ZTU2 488 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 RTP3Q9BQQ7 232 aa23.81■■□□□ 1.4
FAM53B-201ENST00000280780 BARX2Q9UMQ3 279 aaPredicted RBP23.81■■□□□ 1.4
FAM53B-201ENST00000280780 CYP26A1O43174 497 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 TBX10O75333 385 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 KRT5P13647 590 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 FGFR3P22607 806 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 LMO2P25791 158 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 CLCN1P35523 988 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 USP8P40818 1118 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 STAT1P42224 750 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 NDST1P52848 882 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 DSG1Q02413 1049 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 ZNF394Q53GI3 561 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 WDR59Q6PJI9 974 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 PRSS55Q6UWB4 352 aaPredicted RBP23.8■■□□□ 1.4
FAM53B-201ENST00000280780 IRF2BP2Q7Z5L9 587 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.8■■□□□ 1.4
FAM53B-201ENST00000280780 EFHBQ8N7U6 833 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 RBBP8NLQ8NC74 664 aaPredicted RBP23.8■■□□□ 1.4
FAM53B-201ENST00000280780 ZNF397Q8NF99 534 aaPredicted RBP23.8■■□□□ 1.4
FAM53B-201ENST00000280780 KLHL5Q96PQ7 755 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 AIPL1Q9NZN9 384 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 CLEC1BQ9P126 229 aa23.8■■□□□ 1.4
FAM53B-201ENST00000280780 H3BQ06 376 aaPredicted RBP23.79■■□□□ 1.4
FAM53B-201ENST00000280780 TRAPPC3O43617 180 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 TYMPP19971 482 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 HNRNPH3P31942 346 aaKnown RBP23.79■■□□□ 1.4
FAM53B-201ENST00000280780 RAD23BP54727 409 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 USP41Q3LFD5 358 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 SFMBT2Q5VUG0 894 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 LLGL2Q6P1M3 1020 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 CEP57Q86XR8 500 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 TMEM86AQ8N2M4 240 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 OR8K1Q8NGG5 319 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 DPEP3Q9H4B8 488 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 FAM124BQ9H5Z6 455 aaPredicted RBP23.79■■□□□ 1.4
FAM53B-201ENST00000280780 MRPL17Q9NRX2 175 aaKnown RBP23.79■■□□□ 1.4
FAM53B-201ENST00000280780 KCND1Q9NSA2 647 aa23.79■■□□□ 1.4
FAM53B-201ENST00000280780 SYN3O14994 580 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 RPL17P18621 184 aaKnown RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 KCNA5P22460 613 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 YWHAEP62258 255 aaKnown RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 ARID5AQ03989 594 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 SLC4A11Q8NBS3 891 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 OR6B3Q8NGW1 331 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 FEZF2Q8TBJ5 459 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 RIN2Q8WYP3 895 aaPredicted RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 SYN2Q92777 582 aaPredicted RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 THEGQ9P2T0 379 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 FAM163BP0C2L3 166 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 GNL1P36915 607 aaPredicted RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 GLUD2P49448 558 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 KCNQ1P51787 676 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 ELAVL2Q12926 359 aaKnown RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 CCDC142Q17RM4 750 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 HGSNATQ68CP4 663 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 SLC47A2Q86VL8 602 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 LNX1Q8TBB1 728 aaPredicted RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 LPIN3Q9BQK8 851 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 DDX43Q9NXZ2 648 aaKnown RBP23.78■■□□□ 1.4
FAM53B-201ENST00000280780 DSEQ9UL01 958 aa23.78■■□□□ 1.4
FAM53B-201ENST00000280780 TEX28O15482 410 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 URODP06132 367 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 PDGFRBP09619 1106 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 ACAT1P24752 427 aaKnown RBP23.77■■□□□ 1.4
FAM53B-201ENST00000280780 CLUL1Q15846 466 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 ASIC2Q16515 512 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 MEA1Q16626 185 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 VARS2Q5ST30 1063 aaKnown RBP23.77■■□□□ 1.4
FAM53B-201ENST00000280780 OVOS1Q6IE37 1185 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 RSPO2Q6UXX9 243 aaPredicted RBP23.77■■□□□ 1.4
FAM53B-201ENST00000280780 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.77■■□□□ 1.4
FAM53B-201ENST00000280780 OLIG1Q8TAK6 271 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 SLC22A17Q8WUG5 538 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 BAG1Q99933 345 aaPredicted RBP23.77■■□□□ 1.4
FAM53B-201ENST00000280780 ZSWIM1Q9BR11 485 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 NUCKS1Q9H1E3 243 aaKnown RBP23.77■■□□□ 1.4
FAM53B-201ENST00000280780 SNX25Q9H3E2 840 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 RXFP1Q9HBX9 757 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 COG5Q9UP83 839 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 HCFC2Q9Y5Z7 792 aa23.77■■□□□ 1.4
FAM53B-201ENST00000280780 A8MXQ7 604 aa23.76■■□□□ 1.39
FAM53B-201ENST00000280780 ADAM12O43184 909 aa23.76■■□□□ 1.39
FAM53B-201ENST00000280780 OAZ2O95190 189 aa23.76■■□□□ 1.39
FAM53B-201ENST00000280780 PLEKP08567 350 aaPredicted RBP23.76■■□□□ 1.39
FAM53B-201ENST00000280780 EPCAMP16422 314 aa23.76■■□□□ 1.39
FAM53B-201ENST00000280780 FERP16591 822 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms