RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
C9orf3-201ENST00000277198 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 ABHD15Q6UXT9 468 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-201ENST00000277198 TDRPQ86YL5 185 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 CFAP57Q96MR6 1250 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 TRIM7Q9C029 511 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 POLR3FQ9H1D9 316 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-201ENST00000277198 EURLQ9NYK6 297 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 NKIRAS1Q9NYS0 192 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 SLC9A2Q9UBY0 812 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 TPX2Q9ULW0 747 aaKnown RBP13.64□□□□□ -0.23
C9orf3-201ENST00000277198 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 GNA15P30679 374 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 PTPN7P35236 360 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 NAMPTP43490 491 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 PRKCEQ02156 737 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 RASA2Q15283 850 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 CCDC38Q502W7 563 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 ANKS1BQ7Z6G8 1248 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 HERPUD2Q9BSE4 406 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 CD248Q9HCU0 757 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 PDGFCQ9NRA1 345 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 SEPT9Q9UHD8 586 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 DRG1Q9Y295 367 aaKnown RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 R3HDM2Q9Y2K5 976 aaKnown RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 MSCO60682 206 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 TJP3O95049 919 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 LSM8O95777 96 aaKnown RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 CLTAP09496 248 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 ACTR2P61160 394 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 TAP1Q03518 808 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 CCDC15Q0P6D6 951 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 NEDD9Q14511 834 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 IZUMO3Q5VZ72 239 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 NUGGCQ68CJ6 796 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 TRMT1LQ7Z2T5 733 aaKnown RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 SPATA21Q7Z572 469 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 MYCBPQ99417 103 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 CGRRF1Q99675 332 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 SENP6Q9GZR1 1112 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 KCNK9Q9NPC2 374 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 SENP1Q9P0U3 644 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 PRKAG3Q9UGI9 489 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 NAALADL1Q9UQQ1 740 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 PCDHB4Q9Y5E5 795 aa13.63□□□□□ -0.23
C9orf3-201ENST00000277198 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
C9orf3-201ENST00000277198 ATP2C2O75185 946 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 VNN1O95497 513 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 CALB1P05937 261 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 EZRP15311 586 aaKnown RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 STX2P32856 288 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 SKIV2L2P42285 1042 aaKnown RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 BNIP1Q12981 228 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 CCDC60Q8IWA6 550 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 C11orf70Q9BRQ4 267 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 HTATIP2Q9BUP3 242 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 PHACTR1Q9C0D0 580 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 ZNF518BQ9C0D4 1074 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 RXFP1Q9HBX9 757 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 FGFR1OP2Q9NVK5 253 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 MAGEB2O15479 319 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 RGS20O76081 388 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 ATP6V1G2O95670 118 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 SUPT20HL2P0C7V6 817 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 RARBP10826 455 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 AKR1A1P14550 325 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 MMP8P22894 467 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 ADCYAP1R1P41586 468 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 MAGEA4P43358 317 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 ALDH5A1P51649 535 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 POLGP54098 1239 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 NLRP11P59045 1033 aaKnown RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 TAS2R40P59535 323 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 IL9RQ01113 521 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 EMC2Q15006 297 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 TRIP13Q15645 432 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 TMEM270Q6UE05 265 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 FAM228AQ86W67 206 aa13.62□□□□□ -0.23
C9orf3-201ENST00000277198 RBM15Q96T37 977 aaKnown RBP eCLIP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 ZMYND8Q9ULU4 1186 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 MAFBQ9Y5Q3 323 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-201ENST00000277198 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms